Orcinus orca (killer whale): 101270889
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Entry
101270889 CDS
T05247
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101270889 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101270889 (POLR1B)
Enzymes [BR:
oor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101270889 (POLR1B)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101270889 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
101270889
NCBI-ProteinID:
XP_004276807
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All DBs
Position
13:11723012..11752689
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPDGRWRHLPSGPSLKHLTDPSYGIPREQQQPALQELTRAHVESFNYAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPTVPKGSICKELNVYPAECRGRRSTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSKLCNLYNLPPKALIQHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFFPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQV
LSYLGERFRVKLSLPDWYPNEHAAEFLFSQCICIHLKSNTEKFYVLCLMTRKLFALAKGE
CMEENPDSLVNQEVLTPGQLFLMFLKEKLEAWLASIKIAIDKKAQKTNVSLNTENLMKIF
TLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTTICEVVTQFVYTASIPALLCNLGVT
PVDGAPHRPYSECYPVLLDGVMVGWADKELAPGIADSLRHFKVLREKRIPPWMEVVLVPM
TGKPSLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNVAVFEDEVLAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSECID
LSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYGDPYYSYVNLNTGESFVMY
YKSKENCIVDNIKVCSNDTGNGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNYYGTERLYSGISGLELDADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSTMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDIV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgacggccgatggcggcacctacccagcgggcccagcctaaagcacttgacc
gacccctcttacgggatcccgcgggagcagcaacagccagcgttgcaggagctgacgcgg
gcgcatgtcgagtccttcaactacgctgtgcgcgaggggctcagccacgcggtgcaggcc
atccctccctttgaatttgctttcaaagatgagcggatctctcttactattgtggatgct
gtcatcagtccacccacagttccaaaagggagcatctgtaaagagctcaatgtttatcca
gcagaatgccggggccgaaggagcacctaccggggaaagctgacggccgatatcagctgg
gcagtgaatggaatctcgaaaggaatcattaaacagtttcttggctatgttcccatcatg
gtgaaatccaagctttgcaacttatacaaccttcctccaaaagccctcatccagcaccac
gaggaagcagaggaaatgggaggctattttataatcaatggcatcgaaaaagtcatacga
atgttgattatgcctcgcagaaatttccccattgcaatggtaagaccaaaatggaaaagc
agagggcctggctatactcagtatggagtttcaatgcactgtgtgagggaagaacattcc
gccgtcaatatgaaccttcactacttggaaaatggcacggttatgttgaactttatttac
cggaaagaactgtttttttttcctttgggatttgcacttaaggcacttgtcagcttttcc
gattatcagatttttcaggagctcatcaaaggaaaggaagatgactctttctttaggaac
tctgtttctcagatgttaaggattgtaatggaagagggatgttccacacaaaaacaggtc
cttagctatctgggggaacgcttcagagtaaaactcagtcttcctgactggtacccaaat
gaacacgctgcagagtttctcttcagccagtgcatctgtatccacttgaaatccaacact
gaaaagttttatgtgctttgtctcatgacccggaagctctttgctttagccaaaggagag
tgcatggaggagaatcctgacagtttagtgaatcaagaggtcctgacccccgggcagctc
ttcctcatgtttctgaaggaaaaattggaagcttggttagcatctattaaaatagctata
gacaagaaggcccagaagaccaatgtgtccttaaacactgaaaatttgatgaagattttt
actctgggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctacgt
tctaaaacaggtctcggcttcctgcaagattccggactttgtgttgtggctgacaagctg
aacttcatacgctatctctcccacttccgctgtgtgcacagaggggcagattttgccaag
atgcggaccaccacagtacgcaggctgctgccggagtcctggggtttcctttgccccgtg
cacacccccgacggggagccctgtggtctgatgaaccacttaaccaccatatgtgaggtc
gtcacacagtttgtgtatacagcatctattccagctttgctctgcaacttgggcgtcact
ccggttgacggagcgccacatcggccgtacagcgagtgctaccctgtcctgctggacggc
gtcatggttggctgggcggataaggagcttgctcctggcattgccgattctctccgacat
tttaaggttttgagagaaaaaagaattcctccctggatggaggtggtcctggtccccatg
acaggaaaaccaagtctgtacccaggattgtacctttttaccactccttgtagactggtg
cggcctgtgcagaacttggaattgggcaaagaagaactaattggaactatggaacagatc
ttcatgaacgttgctgtctttgaggatgaggttttggctggcgttaccacccaccaggag
ctcttccctcacagcctgctgagtgtgatcgccaacttcatccctttctctgatcacaac
caaagtccaagaaacatgtaccagtgccagatgggtaagcagactatgggctttccactc
ctcacttttcaagaccggtcagataataaactgtatcgtcttcagactccacaaagccct
ttagtgcgaccatacatgtatgattattatgacatggataactatccaattgggacaaat
gccattgttgctgttatttcttacactggctatgatatggaagatgccatgattgtgaat
aaggcttcttgggaacgaggctttgcccatggaagtgtctacaagtccgagtgtatagat
ctgtctgaaaaaatcaaacaaggagatgatagtctggtctttggagtcaaacctggtgac
ccacggattctgcagaagttggatgatgacggattgccatttattggagcacaactgcag
tatggagatccatattacagctacgtaaacctcaacaccggggaaagctttgtgatgtac
tataagagtaaagaaaattgtattgtggataacatcaaagtgtgcagtaatgacactgga
aatggcaaattcaagtgtgtttgcatcacgatgagagtccctcggaacccaactatcggg
gataaatttgccagtcgtcatgggcagaagggcatcttgagcagactgtggccagttgag
gacatgccattcactgagagcgggatggttccagacattctgttcaatcctcacggtttt
ccatcccgcatgaccatcggtatgttgattgagagtatggcagggaagtctgcagcttta
catggtctctgccatgatgctacgcccttcatcttctcagaggagaactcggccctggag
tactttggtgagatgttgaaggctgctggctacaactactatggcactgagaggttgtat
agtggcatcagtgggctagagctggatgcagacatcttcataggtgtggtttattaccaa
cgcttacgccacatggtctcagacaaattccaagttaggacaacaggagccagagacaaa
gtcactaaccagcctatcgggggaagaaacgtccagggtgggatccgttttggggagatg
gagcgggacgcccttttagctcatggtacatcttttctccttcacgaccggctcttcaac
tgctcggatcggtctgtagcccacgtgtgtgtgaagtgtggtagtttgctctccccgctg
ttggagaagccacccccatcgtggtccaccatgcgcaacaggaagtacaactgtactctg
tgtaaccgcagtgacaccatcgacactgtttccgtgccttacgtctttcggtattttgta
gctgaactggcagctatgaacatcaaagtgaaactggatatcgtttaa
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