Orcinus orca (killer whale): 101278622
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Entry
101278622 CDS
T05247
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X4
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04014
Ras signaling pathway
oor04015
Rap1 signaling pathway
oor04020
Calcium signaling pathway
oor04024
cAMP signaling pathway
oor04080
Neuroactive ligand-receptor interaction
oor04713
Circadian entrainment
oor04720
Long-term potentiation
oor04724
Glutamatergic synapse
oor05010
Alzheimer disease
oor05014
Amyotrophic lateral sclerosis
oor05016
Huntington disease
oor05017
Spinocerebellar ataxia
oor05020
Prion disease
oor05022
Pathways of neurodegeneration - multiple diseases
oor05030
Cocaine addiction
oor05031
Amphetamine addiction
oor05033
Nicotine addiction
oor05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
101278622 (GRIN1)
04015 Rap1 signaling pathway
101278622 (GRIN1)
04020 Calcium signaling pathway
101278622 (GRIN1)
04024 cAMP signaling pathway
101278622 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101278622 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101278622 (GRIN1)
04720 Long-term potentiation
101278622 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
101278622 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101278622 (GRIN1)
05014 Amyotrophic lateral sclerosis
101278622 (GRIN1)
05016 Huntington disease
101278622 (GRIN1)
05017 Spinocerebellar ataxia
101278622 (GRIN1)
05020 Prion disease
101278622 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
101278622 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
101278622 (GRIN1)
05031 Amphetamine addiction
101278622 (GRIN1)
05033 Nicotine addiction
101278622 (GRIN1)
05034 Alcoholism
101278622 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oor04040
]
101278622 (GRIN1)
Ion channels [BR:
oor04040
]
Ligand-gated channels
Glutamate (ionotropic)
101278622 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
101278622
NCBI-ProteinID:
XP_004285002
LinkDB
All DBs
Position
6:120157937..120181333
Genome browser
AA seq
943 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
VLSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTQYHPTDITGPLNLSDPSVSTVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacactcgccctgcttttctcctgctccttcgcccgtgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtactgagcacgcggaagcacgagcag
atgttccgcgaggctgtgaaccaggccaacaagcggcatggctcctggaagatccagctc
aacgccacctccgtcacccacaagcccaacgccatccagatggccttgtcggtgtgcgaa
gacctcatctccagccaggtctacgccatcctagttagccacccgcctacccccaacgac
cacttcactcccacccccgtctcctacacagccggcttctaccgcatccccgtcctgggg
ctgaccacccgcatgtccatctactcagacaagagcatccaccttagcttcctgcgcacc
gtgccgccctactcccaccagtcgagcgtctggttcgagatgatgcgcgtctacagctgg
aaccacatcatcctcctggtcagcgacgaccacgagggccgggcggcgcagaagcgcctg
gagaccctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggctgagaaggtgctgcagttcgacccg
gggaccaagaacgtgacggccctgctgatggaggcgcgggagctggaggctcgggtcatc
gtcctctccgccagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgaccggctcggggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggcatcatcgggctgcagctcatcaacggcaagaacgagtcggcc
cacattagcgatgccgtgggggtggtggcccaggccgtgcacgagcttctcgagaaggag
aacatcaccgatccgccgcggggctgcgtgggcaacaccaacatctggaagaccgggccg
ctcttcaagagagtgctcatgtcttccaagtacgcagacggcgtgaccggccgcgtggaa
ttcaacgaggatggggaccggaagtttgccaactacagcatcatgaacctgcagaaccgc
aagctggtacaagtgggcatctacaacggcacccatgttattcccaacgacaggaaaatc
atctggccaggcggagagacagagaagccccgaggttaccagatgtccaccaggctgaag
atcgtgacgatccaccaggagcccttcgtgtatgtcaagcccacgctgagcgacggcacg
tgcaaggaggagttcaccgtgaacggggatccggtgaagaaggtgatctgcaccgggccc
aacgacacgtcgccgggcagcccacgccacaccgtgcctcagtgctgctacggcttctgc
atcgacctactcatcaaactggcgcggaccatgaacttcacttatgaggtgcacctagtg
gcggacggcaagttcggcacgcaggagcgggtgaacaacagcaataagaaggagtggaac
gggatgatgggcgagctgctcagcgggcaggcagacatgatcgtggcgccgctgaccatc
aacaacgagcgcgcacagtacatcgagttctccaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacgctggactcgttcatgcagcccttccag
agtacgctctggctgctggtggggctgtcagtgcatgtggtggccgtgatgctgtacctg
ctggaccgcttcagcccctttggccggttcaaagtgaacagcgaggaggaggaggaggat
gcgctgaccctgtcctcggccatgtggttctcctggggcgtcctgctcaactcgggcatc
ggggaaggcgcccccagaagcttctcggcgcgcatcctgggcatggtgtgggccggcttc
gccatgatcatcgtggcctcctacactgccaacctggcggccttcctggtgctggaccgg
cccgaggagcgcatcaccggcatcaacgatccccggctgaggaatccttcggacaagttc
atctacgcgacggtgaagcagagctccgtggacatctacttccggcggcaggtggagctg
agcaccatgtaccggcacatggagaagcacaactacgagagcgcggccgaggccatccag
gccgtgcgggacaacaagctgcatgccttcatctgggactcagcggtgctggagttcgag
gcctcgcagaagtgcgacctggtgaccaccggcgagctgttcttccgctcaggctttggc
atcggcatgcgcaaagacagtccttggaagcagaacgtctccctgtccatcctcaagtcc
cacgagaacggcttcatggaagacctggacaagacgtgggtgcggtaccaggagtgtgat
tcgcgtagcaacgcccctgctaccctcacgttcgagaacatggcaggggtcttcatgctg
gtggccgggggcatcgtggccgggatcttcctgatcttcatcgagatcgcctacaagcgg
cacaaggatgctcgccggaagcagatgcagctggcctttgcagcagtgaacgtgtggaga
aagaacctgcaggatagaaagagtggtagagcagagcctgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcttccagcttcaagagacgtaggtcctccaaagac
acgcagtaccatcccactgatatcacgggcccgctcaacctctcagatccctcggtcagc
accgtggtgtga
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integrated database retrieval system
