KEGG   Orcinus orca (killer whale): 101280064
Entry
101280064         CDS       T05247                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA43-like
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101280064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oor03021]
    101280064
Transcription machinery [BR:oor03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     101280064
SSDB
Motif
Pfam: SHS2_Rpb7-N RPA43_OB
Other DBs
NCBI-GeneID: 101280064
NCBI-ProteinID: XP_033285388
LinkDB
Position
5:59033541..59034805
AA seq 323 aa
MAAGCSVSPRSKAASEGPVVGPAGVLPCLELPTYVAACALVNSRYSCLVAGPHRRHIALS
PRYLNRKRTGIREQLDAELLRYSESLLGVPIAYDNIKVVGELGAIYDDQGHIHLNTEADF
VIFCPEPGQKLMGTVNKVSSSHIGCXPKPEQMLAEQWQTLKINMGDELEFEVFRLDSDAA
GVFCIRGKLNTTSLQTKCSAVSEEVTETGTEEATEKPQKKKKKKNKDPEPYEVETGTTEL
ADFADVTMKEETDLQINNNVNGLWEEEPKKKKKHQDPVFQGSDSSGYQSDHKKXKKKRKH
SEEAEFTPLLEHAPKRKGKSNFL
NT seq 972 nt   +upstreamnt  +downstreamnt
atggctgcgggttgctcagtgtctccgcggtcgaaggcggcctcagaagggccggtggtg
ggaccagccggcgtcttgccttgcctagaattgcctacctacgtggccgcttgtgcgctc
gtgaatagccgctactcctgcctggtggcggggccgcaccgaagacacatcgcactgtcg
ccgcgctaccttaacaggaaacgcaccggtatccgagaacagctcgatgccgagctcctg
cgctattccgagagccttttaggtgtacccattgcttatgataacatcaaagtagtgggt
gaattaggagctatttatgatgatcaaggacacattcatcttaacactgaagcagatttt
gttattttctgccctgaaccagggcaaaaacttatgggtacagttaataaagtgtcttcc
agccacattggctgtnntcctaaacctgagcagatgctagccgagcagtggcagactctg
aagataaacatgggtgatgaactagaatttgaagtatttcgtttagactcagatgctgct
ggagtattctgcattcggggaaaactaaataccactagtttacaaacgaagtgctctgca
gtttctgaagaagtaacagaaactggcactgaagaagctactgaaaaacctcaaaagaag
aaaaagaaaaagaacaaagacccagagccatatgaagtggaaactggtaccacagagcta
gcagattttgcagatgttaccatgaaggaagagacagatctgcagattaataacaatgtg
aatggcctctgggaggaagagccgaagaagaagaaaaagcatcaggaccctgttttccaa
ggcagtgactccagtggttaccaaagtgaccataaaaagnaaaaaaagaaaagaaagcac
agtgaggaggctgagtttacaccacttttggaacatgcacctaaaagaaaagggaaaagt
aattttctttag

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