Orcinus orca (killer whale): 101289059
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Entry
101289059 CDS
T05247
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04721
Synaptic vesicle cycle
oor04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
101289059 (SLC6A4)
04721 Synaptic vesicle cycle
101289059 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oor02000
]
101289059 (SLC6A4)
Transporters [BR:
oor02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101289059 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
101289059
NCBI-ProteinID:
XP_004267144
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Position
19:complement(6266727..6303950)
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AA seq
629 aa
AA seq
DB search
METTPLNSQKELTAYVDGEDCQGNSVLQRGVPVPGDKAESSQISNGYSAVPSPSAEDTQH
SIPAATTTLVAEVHPGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPY
TIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMA
WALYYLISSFAAQLPWTSCKNSWNTGNCTNYFSEDNVTWTLHSTSPAEEFYTRHVLQIHR
SKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGAT
LPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDA
LVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAST
FFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLSVVITCFFGSLITL
TFGGAYVVKLLEEFATGPAVLTVALIEAIAVYWFYGINQFCSDVKEMLGFSPGWFWRICW
VAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPMYITYRLIITP
GTLKERLIKGITPETPTEIPCGDIHLNAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttaaattcccagaaggagctaacagcatatgtggatggagaagac
tgtcaaggaaacagtgttctacagaggggtgtccctgtccctggggataaggcggagtcc
agccaaatctcgaatgggtactcagcagttccaagccccagtgcagaagacactcagcat
tccatcccggctgccaccaccaccctagtggctgaggttcatccaggggaacgggagacc
tggggcaagaaggtggatttcctcctctccgtcattggctatgctgtggacctgggcaac
gtctggcgctttccctacatctgttaccagaatggaggtggggcattcctcctcccctac
actatcatggccgttttcggggggatcccgctcttctacatggagctcgcgctgggccag
taccaccgaaatggatgcatttcgatatggaggaaaatctgcccgattttcaaagggatc
ggttacgccatctgcatcattgccttttacatcgcctcctactacaacaccatcatggcc
tgggcgctctactacctcatctcctcttttgcggcccagctgccctggaccagctgtaag
aactcctggaacactggcaactgcaccaactacttctccgaggacaacgtcacctggaca
ctccactcaacatcccctgcagaagaattttatacgcgccacgtcctgcagatccaccgg
tcaaaggggctccaggacctggggggcatcagctggcagcttgccctctgcatcatgctg
atcttcactgttatctactttagcatctggaaaggtgtcaaaacatctggcaaggtggtt
tgggtaacagccaccttcccttacatcatcctttcgatcctgctggtgaggggggccacc
ctccccggagcctggaggggagttctcttctatttgaaacccaactggcagaaactcctg
gagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggtcctggcttt
ggggtcctgctggctttcgcgagctacaacaaattcaacaacaactgttaccaagacgcc
ttggtgaccagcgtggtgaattgcatgacgagcttcgtttcaggatttgtcatcttcaca
gtgctggggtatatggctgagatgaggaacgaagatgtgtctgaggtggccaaagatgca
ggccccagcctgctcttcatcacatatgcggaagccatagccaacatgccggcatccacg
ttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacatttgca
ggcttggagggggtgatcacagccgtgctggatgagtttccacacatctggtctaagcgc
cgggagtggtttgtgctcagcgtggtcattacctgcttctttggatccctcatcaccctg
acttttggaggggcctatgtggtgaagctgctggaggagtttgccacgggacccgcagtg
ctcactgttgccctgatagaagcaattgctgtgtattggttctatggcatcaatcagttc
tgcagtgacgtgaaggaaatgcttggcttcagccctggatggttttggaggatctgctgg
gtagccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccacca
cagctacgactttttcagtataattatcctcagtggagcatcatcctgggttactgcata
ggaacctcatctttcatctgcatcccgatgtatataacttatcggctgatcatcactcca
gggacacttaaggagcgtcttattaaaggtatcactccagaaacaccgacagaaattccc
tgtggggatatccacttgaacgctgtgtaa
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