Ogataea parapolymorpha: HPODL_02987
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Entry
HPODL_02987 CDS
T08137
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPODL_02987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_02987
Enzymes [BR:
opa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPODL_02987
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
HPODL_02987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
25772434
NCBI-ProteinID:
XP_013932791
UniProt:
W1Q8M6
LinkDB
All DBs
Position
VII:complement(1044270..1047770)
Genome browser
AA seq
1166 aa
AA seq
DB search
MTTAKFRTLEREHRFKNPPKDRSAFQMLYDAVRPHVGSFNALTEGPDGGLLNLAVKDIGT
KTIFDTNDATGSGNKLRIRVDSVQIAKPQVPSTDKLSVVRNTYPAECRERMTTYRARLLL
KVCWSINDGEEISEVREAGQIPIMLQSNRCHLENLSPDQLVKLREESDELGGYFIVNGIE
KLIRMLIVQRRNHPMAIIRPSFANRGTSYSHFGVQIRSVRPDQTSQTNVLHYLNDGNVTF
RFSWRKNEYLIPVVMILKALIETNDREIFDGVVGADTGNSFLTDRLELLLRTYKNYNLYS
QKETLAYLGDKFRVVFGATPDMSDISVGEEVIKRIVLVHLENNEDKFRMLLFMIRKLYSL
VAGDCSPDNPDATQHQEILLGGFLYGMILKEKIEEYLQNIRLQVQSDINRGIAVNFSDRK
YMSRVFLRINENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRMVH
RGSFFAQLKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCRITTKASDVTKVPKL
LHKLGVSPTASAINISGPNVCCVQLDGRIIGWCSHKQGKIVADTLRFWKVEGHHDIPLDL
EIGYVPPSSGGQYPGLYLFAGASRMVRPVRYLPLDKEDIVGPFEQVFMNVAVIPSEIENN
IHTHVEFAPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGVALCHRSDNKLYRL
QSGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGYDMDDAMIINKSADERGFGYGVVY
KVEKVDLSLNRKRGDPITQHFGFGSDEWPESWKEKLDNDGLPHIGVHVEEGDPICAYYDD
ILGKTKVKTYHSSEPAFIEEVKLLGDDNGTSEFQTLSIKYRITRQPLIGDKFSSRHGQKG
VCSRKWPQIDMPFSETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGIAQDATPWK
FSESDTPADYFGEQLQRAGYNYHGNEPLYSGVTGEELRADIYIGVVYYQRLRHMVNDKFQ
VRSTGPVNSLTLQPVKGRKRHGGIRVGEMERDALIGHGTSFLLQDRLLNCSDYTQTAICR
SCGSLLSTQMSVPRIGTQATTRCRRCAKKIDRVLQNTDEMDIWEDGQGTKFIGGGDTTTV
AIPFVLKYLDSELSAMGIRMHYNVVP
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcgaagttcagaaccttggaaagggagcaccgcttcaaaaaccctccgaag
gacagatcggctttccagatgctttatgacgctgtcaggccgcatgtcggatctttcaac
gccttgacagaggggcccgatggaggacttttgaacttagccgttaaagacattggaaca
aaaacaatttttgacactaatgatgccactggctcgggcaataaattgagaataagagtt
gactctgtgcagatcgccaaaccgcaagttccttcgaccgacaaactctcggtggttaga
aacacctacccggcagagtgtagagaaagaatgacaacttacagggccagactcctgctc
aaagtgtgttggtctattaacgatggcgaagagattagtgaagtcagagaagcaggtcaa
atcccgatcatgttgcaatccaacagatgtcaccttgaaaacttgtcccctgatcagctt
gttaaactaagagaagagagcgatgaattgggaggttattttattgtcaatggtattgaa
aaactgatcagaatgcttattgtgcaaagacgcaaccatccgatggctatcatcagacca
tcgttcgctaatagaggcacatcgtattcgcattttggtgttcagattcgctcggtgagg
ccagatcaaacttcgcagacaaatgttttgcactacttgaatgatggaaatgttactttc
aggttttcttggagaaagaacgagtatctgattcctgtggtgatgatcttgaaagcattg
atcgaaactaatgatagagaaatctttgatggtgttgtgggtgccgacactggaaattct
ttcttgacagatcgtttggaattgttgttaagaacttataagaactacaatctttactcg
caaaaagagaccctagcatatcttggtgacaaatttagggtggtgtttggtgctacccct
gacatgtctgatatcagcgtgggtgaggaagttatcaagagaattgttctagttcacttg
gaaaacaacgaggataaattccgtatgctcctattcatgatcagaaaactctactcttta
gtggccggagattgttctccagacaatccggatgcaactcagcatcaagagattttgctg
gggggtttcctctatggaatgattttgaaagaaaaaatcgaggaatatctccaaaacatc
agattgcaagtacaatctgacatcaatagaggcattgcagtgaatttctcagacaggaag
tacatgtcaagagtgttcttgagaatcaatgaaaatattggccagaagctgcagtacttt
ttgtcaaccggtaacttggtctcgcaatctggtctagatttgcaacaagtgagtggttac
accgtggtggcagaaaaaatcaatttccaccgtttcatttctcacttccgaatggtccat
agaggttctttctttgcgcagttgaagaccacggcggtccgtaaattacttccagaatct
tggggatttttgtgtcctgtccacactccagatggatctccttgtggattgctaaatcac
ttggcccacaaatgccgaattactaccaaagcatccgacgtcacaaaggtcccaaagctg
ctccacaaactgggtgtctcacctactgcgtccgctataaacatttctggtccaaatgtc
tgctgtgttcaattggacggtagaattattggctggtgctctcacaagcagggaaagatc
gttgccgacactttgagattttggaaggtggaagggcaccacgatattccgctcgatttg
gaaattggatatgttccgccatcctctggcggtcaatatccaggtctttatttgtttgct
ggagcctcgagaatggtgagaccagtcaggtaccttccattggacaaagaggatattgtt
ggtcccttcgagcaagttttcatgaacgttgccgttattccttctgagatcgaaaataat
atccacacacacgttgaatttgcaccaaccaatatcttgtccatcctagctaatttaaca
ccattttcggatttcaatcagtcgccaagaaacatgtaccaatgtcagatgggtaagcaa
accatgggaactcctggtgttgcgctgtgccacagaagcgacaacaagctctaccgtctt
caatcgggtcagactccaatcgttaaagccaatctttatgacgattatgggatggataat
ttccctaacggcaccaacgcagtggtcgctgttatttcgtataccggatatgatatggac
gatgcaatgataatcaataagtccgctgacgagaggggattcggttacggagtggtgtac
aaagttgaaaaagtggacttatctttgaatagaaagagaggagatccaatcactcaacat
tttggctttggaagcgatgaatggcctgaaagctggaaagagaagttggataacgatggg
ctgccacacatcggagttcacgtggaagagggtgaccctatttgcgcttattacgatgat
attttgggcaaaactaaagtgaagacctaccatagctctgagccagctttcattgaggaa
gtgaagcttctgggagacgacaatggaacaagcgagttccagacgctttcgataaagtac
cgtatcacgagacagccattaattggagacaagttctcgtcgagacacggccaaaaaggt
gtttgttcgagaaagtggcctcaaattgatatgcctttcagcgagactggtattcagccg
gacgtgatcatcaatccgcatgcgttcccatcgagaatgactattggtatgtttgtcgag
tctcttgccggaaaagctggagctttgcacggtattgctcaggacgcaactccatggaag
ttcagcgaatctgacacaccagccgactatttcggtgagcagctccaaagagccggttac
aactaccacggaaacgagccgttgtattctggtgtgacaggagaagagcttcgcgccgac
atatacattggtgtcgtttattaccaaagattgagacacatggtgaacgataaattccaa
gtcagatctacaggtccagtgaattctctcacattgcaacctgtcaagggtagaaagaga
cacggaggtattcgtgtaggagaaatggagagagatgctcttatcggtcacggaacttct
ttcttgcttcaagacagattgctcaactgctcggactacacacaaactgccatttgccgc
tcgtgtggctcgttactgtccacgcaaatgtctgtccctcgcattggcactcaggccact
acgagatgtcgccgctgtgccaaaaaaattgatcgtgtgctacagaatacggatgaaatg
gatatctgggaggatggtcaaggaaccaagtttattggtggcggagatacaaccactgtc
gctattccgtttgttctcaagtacctggattctgagctgtcagctatgggcatccgcatg
cactacaatgttgtgccctag
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integrated database retrieval system
