Oceanimonas pelagia: PU634_14820
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Entry
PU634_14820 CDS
T09373
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ope
Oceanimonas pelagia
Pathway
ope00540
Lipopolysaccharide biosynthesis
ope01100
Metabolic pathways
ope01250
Biosynthesis of nucleotide sugars
Module
ope_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PU634_14820 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ope01005
]
PU634_14820 (rfaD)
Enzymes [BR:
ope01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PU634_14820 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ope01005
]
Core region
PU634_14820 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WMC10331
UniProt:
A0AA50QBP8
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All DBs
Position
3096034..3096987
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AA seq
317 aa
AA seq
DB search
MIIVTGGAGFIGSNLVKTLNEQGRTDVVVIDDLTDGTKFVNLVDLTIADYLDKDEFLHRI
VSGDEFEEWGGIEVIFHEGACSATTEWNGKFMMENNYEYSKDLLHYCLEREIPFIYASSA
ATYGGRNDNFIEEPQYEQPLNVYGYSKQLFDQYVRRLMPEISSQVVGLKYFNVYGPREQH
KGSMSSVAFHLNTQLHQGENPKLFEGCDGYGNGGQMRDFIYVGDVCKVNLWFWQNPTVSG
IFNCGTGRAEPFQHVAEAVIKYHGKGEVEYIPFPDHLKGRYQSFTQADLTKLRAAGYPHE
FKTVAEGVAEYMSWLNK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgtaactggcggtgccggctttattggcagcaacctggtaaaaaccctgaac
gagcaaggccgcaccgatgtggtggtgatcgacgatctgaccgacggcaccaagttcgtc
aacctggtcgacctgaccatcgccgactacctggacaaggacgagttcctgcaccgtatc
gtgtccggcgacgagttcgaggaatggggcggcatcgaggtgatcttccacgaaggcgcc
tgctccgccaccaccgagtggaacggcaagttcatgatggagaacaactacgagtactcc
aaggatctgctgcactactgcctggagcgggaaattccgtttatctacgcctcttccgcc
gccacctacggcggtcgcaacgacaacttcattgaagagccgcaatacgaacaaccgctc
aacgtctacggctactccaagcagctgttcgaccagtatgtgcgccgcctgatgccggag
atcagttcccaggtggtcggcctcaagtacttcaacgtgtacggcccccgcgagcagcac
aagggcagcatgtcgagcgtggcttttcacctcaacactcagctgcaccagggcgaaaac
cccaagctgtttgaaggctgcgacggctatggcaacggcggccagatgcgcgacttcatc
tatgtgggcgacgtgtgcaaggtcaacctctggttctggcagaacccgaccgtatccggc
atcttcaactgcggcaccggccgcgccgagcccttccagcacgtggccgaggcggtgatc
aagtatcacggcaagggcgaggtggaatacatccccttccccgaccacctcaagggtcgt
taccagagctttacccaggccgacctcaccaaactgcgcgccgccggttacccccacgag
ttcaaaaccgtggccgaaggtgtggctgagtatatgagctggctgaataaataa
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