Ochotona princeps (American pika): 101518913
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Entry
101518913 CDS
T07609
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03410
Base excision repair
opi04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101518913 (PARP4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101518913 (PARP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opi03032
]
101518913 (PARP4)
03036 Chromosome and associated proteins [BR:
opi03036
]
101518913 (PARP4)
03400 DNA repair and recombination proteins [BR:
opi03400
]
101518913 (PARP4)
Enzymes [BR:
opi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
101518913 (PARP4)
DNA replication proteins [BR:
opi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101518913 (PARP4)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
101518913 (PARP4)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
101518913 (PARP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
BRCT
VIT_2
VWA
VWA_2
BRCT_2
VWA_CoxE
PARP_reg
PTCB-BRCT
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
101518913
NCBI-ProteinID:
XP_012782226
LinkDB
All DBs
Position
8:1532586..1602908
Genome browser
AA seq
1569 aa
AA seq
DB search
MTLGIFANCTFCLKVKYLPRQQKRKLQFDIKENGGKFSLLLNPQCTHIVLDNADLLSQYQ
LDSIRKKHVHIASPDFIWECIKERRLLDVKNYEPTQALAITLPPDQNTSSSEVKTDDLSL
DDVMSQEDIVEPTEFHVENVEIAHFPQDFEVAKYNTLEKVGISGDPEVVVVELCCSQAPE
DPPFLICAHFLLADGAQTRRQFAVKKTSADASEYYENYIEELKKQGFLLREHFTPQATQL
ASEKLQALLLEEVIGAGPLSPEVSDLVELLWTEALGHLEHTLLKPVNSISLNDVSKAEGI
LLLAKSALKNGETAEQLRKVVAEFYRLIPHKAPGPKEVNLKLLAKEEDLCQLIRDMVNVC
ETNFSKPNPPSLAKYRALRCKIEHVEQHTEEFLSVKKEILKNNHGKHRVNILQMFRVGRV
NETTEFLSKLGNVRLLLHGSPVCNLIGILSRGLLLPKVVEDRGVHRTDIGNLGSGIYFSD
SLSATIKYAHPGETEGTRFLLVCDVALGECIEFNQKDFSLTEAPEGYHSVHGVARTASLN
TDFEDDEFVVYKTNQVKMKYIIKFCLPEDQIKSFRPPNNIELEQYRPPVFSDSSKIEDYQ
LPDTKASSSTQAGLQDISGNLIPLENVHVKGRIIDFVAQVVLFQTYTNQSHVPIEAKYIF
PLDDKAAVCGFEAFINGKHIVGEIKEKEEAQREYREAISQGHGAYLMDQDAPDVFTVSVG
NLPPAAKVLIKITYITELTLQGPVAVFFMPATVAPWQQDKALNENLQDTVEKICVKEIGT
QQSFSLTMSIEMPYVIKFISSDTHELKQKSTDCKAVVSTVEGSSLQSDGFSLHVGLCDPY
LPRMWVEKHPEKESEACMLVFQPCLTATLPDVADGNEVIICLDCSNSMEGVTFTNARKIA
LHALSLLGKKQKVNIVQFGTGYKELFSYPKNITSQKVLTEFILSATPTMGNTDFWKTLRY
LSLLYPAQGLRNILLISDGHLQNESLTLQLVQRSVHHTRLFTCGIGATANRHILRTLSQY
GAGVFEYFNSNSKHSWKKQIEEQMARLHSPSCHSVSVKWQQLNLDAPEPLQAPAQVPSLF
HNDRLLVYGFIPHCTQATLCALIEEKEFQAMVSTTELQKTTGTMIHKLTARALIRDYEDG
ILHENETHHEMKKQTLKSVIIQLSKENSLITQFTSFVAVEKRDGDEAAFPNIPNISTLIA
EEDVDFLPYMSWQEKQPSPRATQHLPSASPAGDAVQVEHSALFDFGAYELEEELLTFDEC
EDAEMPLDLRDMSFSPEGFSNTGRSIASESHDSMANESLSSSGFFEKQSLRHTLDNAPAR
DVRIGSALRVKRHAALQVKRRLALNFEGSVEVDSFHPSDQLPNVMLMQLDTAVKDSQMSM
APYSATKRSKKKIQVLEAGGGGQAVASHQSWMSAVTCRKLFSLQTQDGFWTLTPELGFIL
NVNVNALCSFLEQKGIGSLGVSGRESLLNLIATLLVLQFLRTKLEQEGIVVKSWMTLDAS
SVSREIPLQYTEKIKKANEWVKRMEGQYSSICQRLELGKDWDSATKQLLGIEPGDPASPL
HRALSQSQG
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgactttgggaatctttgcaaattgcaccttctgtttgaaagtcaagtacttacctcgt
caacagaagagaaagctacagtttgacattaaggaaaacggtggaaagttttctctcctt
ctaaatccccagtgcacgcatatcgtcttagacaatgctgatcttctaagccagtaccaa
ctggactctatccgcaagaagcatgtccacattgcaagtcccgatttcatctgggaatgc
atcaaagaaagaagactcttggatgtcaagaactatgagcctacccaagccctggccatc
acgctgcctcctgatcaaaacacgagcagttccgaagtgaaaacggatgacctgtccctg
gatgatgtcatgagccaagaagacattgtggaacccaccgagtttcatgtagagaatgtt
gaaattgctcattttcctcaagattttgaagttgcaaaatataacaccttggaaaaagtg
gggatcagtggcgacccggaggtggtggtggtggagctgtgctgctctcaggcccccgag
gaccctcccttcctgatatgcgcacacttcctgctggctgacggcgcgcagactagaaga
cagttcgctgtcaagaaaacctctgcagatgcaagtgaatactacgaaaattacattgaa
gaactgaagaagcaaggatttctactaagggaacatttcacaccccaagccacccaatta
gcatctgaaaaactgcaagctctgcttttggaggaggtcatcggtgccggccctctgagc
ccggaggtgagcgacttggtggagttgttgtggacggaagctctgggccacctagagcac
acgctgctcaagcctgtgaacagcatcagcctcaacgatgtgagcaaggcagagggaatt
ctccttctagcaaagtctgcactgaagaatggagaaacagcagagcagttgcgaaaggtg
gttgctgaattctacagattaatacctcacaaagccccaggccccaaagaagtcaacctg
aagctcttggctaaggaggaggacctatgccagctaataagagacatggttaatgtctgt
gaaactaatttttccaaacccaacccaccatctcttgccaaataccgagctttgaggtgc
aaaattgagcacgttgaacagcatactgaagagtttcttagcgttaaaaaggagatacta
aagaacaatcacggtaaacatcgtgtgaacatcttgcagatgtttcgagtcggcagagtg
aatgaaaccacagaatttctaagcaaactgggcaacgtgaggctcctgttacacggatct
cctgtctgcaacctcataggaatcctgtcccggggtttgcttttacccaaagtggttgaa
gatcgtggtgtgcacagaacggacattgggaatcttggaagtggaatatacttcagtgat
tcgctcagtgcaactattaaatacgcacatcctggtgagaccgagggtaccaggttcctg
cttgtttgtgacgtggccctcggggagtgtatagaatttaaccagaaggacttctcttta
actgaagccccagaaggctaccacagtgtgcatggagtagcacgaacagcctcgctcaac
acagatttcgaggatgacgaatttgtggtatataaaactaatcaggttaaaatgaaatat
attattaaattttgcctgcctgaggatcaaataaagagctttaggccgcctaacaatatt
gaactagagcaatacagacctcctgtgttctcagacagctcaaaaattgaagattaccag
ttgccagacaccaaagcctccagcagtacccaagctgggcttcaggacatctctgggaat
ttgattccccttgagaatgttcatgtcaaggggagaataatagactttgtagcccaggtg
gttcttttccagacatacacaaatcaaagtcatgtgcccattgaggcaaaatacatcttt
cctttggatgacaaggcagctgtgtgtggctttgaagcattcatcaatgggaagcacata
gtaggagagataaaagagaaggaagaagcccagcgtgaataccgagaggccatcagccaa
ggccatggcgcttacctgatggaccaggatgctccggatgtttttactgtgagtgttggc
aacctgccccctgcagctaaggttcttatcaaaatcacctacatcacagaactgaccctg
cagggccccgtggctgtcttcttcatgccagccactgtggctccctggcaacaggacaag
gccttgaatgaaaaccttcaggatacagtagagaagatttgtgtgaaggaaataggaaca
caacaaagcttctctttgactatgtctatcgagatgccatatgtgatcaagttcatttcc
agtgacacacatgaactaaagcaaaagagcacggactgcaaggcggtcgtcagcaccgtg
gaaggcagctccttgcagagcgacggcttctctcttcacgttggtctgtgtgatccgtac
ctcccaaggatgtgggtggagaaacatccagaaaaagaaagtgaggcgtgcatgcttgtc
tttcaaccctgcctcactgccaccctcccggacgtggccgacgggaacgaggtgatcatt
tgtcttgactgttccaattccatggaaggggtgacattcacaaacgcccgaaagattgcc
ttgcacgcgttgtcgctgctgggcaagaagcagaaagtgaacattgtccagttcggcaca
ggttacaaggagttattttcatatcctaagaacatcacaagccaaaaagtgctgacggag
ttcattttgtcggccacacctaccatggggaacacagacttctggaaaaccctacggtac
ttaagtttactgtaccctgctcaagggttacggaacattctcctgatatctgacgggcac
ctccagaatgagagcctgaccctgcagctcgtgcaaaggagtgtccaccataccaggctg
ttcacctgtgggattggtgctactgcgaatcgtcacatcttgagaactttgtcccagtac
ggtgctggagtgtttgaatattttaactcaaactccaaacatagttggaagaaacagata
gaagagcaaatggccaggctgcattctccgagttgccactctgtctctgtcaaatggcag
cagctcaatttggacgcccctgagcccctgcaggcccctgcccaggtgccctccttgttt
cacaacgaccggctgctcgtctatggattcattccccattgtacacaggcaactctgtgt
gcgctgattgaggagaaggaattccaggccatggtgtcgactactgagcttcagaagacc
acgggaactatgattcacaagctgacagcgcgggctctgatcagagactatgaagacggc
attctccatgaaaacgagacacatcatgagatgaagaaacaaactttgaaatctgtcatc
attcagctcagcaaagaaaactctcttataacacaatttaccagctttgtggcagttgag
aaaagggatggtgatgaggcagcttttcccaatataccaaacatctcaacactcattgcc
gaagaagatgttgacttcctgccttacatgagctggcaggagaagcagccaagtcccagg
gcaacacagcatcttccttcggcatcccctgcaggggacgcagtgcaggtggaacattct
gctctgtttgattttggtgcctatgagctagaggaagagcttctcacatttgatgaatgt
gaagacgcggaaatgccattggatttaagagacatgagtttctctcctgaaggattctct
aacactggtcgcagcatagcctccgaatcccatgattccatggctaatgagagcttgagt
tcaagcggcttttttgaaaagcagtctctcaggcatacccttgacaatgctcctgccaga
gatgtcagaattggttctgccttgcgagtcaaacgtcatgctgccttgcaagtcaaacgt
cgtcttgccttgaattttgagggttccgtcgaagtagacagtttccatccaagtgatcag
cttccaaatgtaatgttaatgcagctggatacagctgtcaaagacagtcaaatgtcaatg
gctccatacagtgcaaccaaaagaagcaaaaagaaaatccaagtcttggaggcaggagga
ggaggacaggccgtggccagtcatcaaagctggatgagtgctgtgacctgcaggaagctc
ttcagcctacaaacccaggatggcttctggacacttacacccgagctaggatttatatta
aacgttaatgtgaatgctttatgcagcttccttgagcaaaaaggcattggttcattaggt
gtcagtggaagagaaagcctcctgaacctgattgccacattgttggtcctgcagtttctt
cgcaccaagctggaacaagagggaatcgttgtcaagtcatggatgacattggacgcatct
tccgtctccagggaaattcctttgcaatacactgagaaaataaagaaagcaaatgaatgg
gtgaaaagaatggaggggcaatattcgtccatctgccagcggcttgaactgggcaaagac
tgggactcggccaccaagcagctcctgggaattgagccaggtgacccagcctctcctctc
catagagctcttagccaaagtcaaggctga
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integrated database retrieval system
