Ochotona princeps (American pika): 101520883
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Entry
101520883 CDS
T07609
Symbol
PALLD
Name
(RefSeq) palladin
KO
K22029
palladin
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101520883 (PALLD)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101520883 (PALLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
101520883
NCBI-ProteinID:
XP_012786899
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All DBs
Position
2A:38337539..38737253
Genome browser
AA seq
1176 aa
AA seq
DB search
MSETSSHDSFYDSLSDMQEEGKHTDFFPVLSAFLSQEEINKSLDLAQRAIADSETEDCDS
EKEISQIFNPSCGSPCANRSHPEAQLVTRSSPVSPQDPRLAPAQPPAGQANSTASPAPRR
KPAMSPLLASPSYIRSLRKAEKRSGKATGCGVKPKPTRAGKAGPQGQLSDKAANLIEELT
SIFREASKPRTRSPNGESSSPDSGYLSPKNQPTALMSASASQSPTGDHQGLEAEVKEPEA
RPVYKVHQDGAAPCASIPRPLPSAASYLLSAPRFTQKLRSQEVAEGSRVYLVCRVTGNPM
PHVRWFCEDKELHNSPDIQIHCEGGDLHTLTIAEAFEDDTGRYTCLATNPSGSDSTSAEV
FIEGASSTDSDSESLAFKAKTGAMPQAQKKTTSVSLTIGSSSPKTGVTTAVIQPLSVPVQ
QVHSPTPYLCRSDGTAAAYFPPVFTKELQNTAASEGQVVVLECRVRGAPPLQVQWFRQGS
EIQDSPDFRILQKKPRSTAEPEEICTLVIAETFPEDAGIFTCSARNDYGSATSTAQLVVT
SANSENCSYDSVGESNNDFQHFPPPPPVLETNSFELASKKPSEIQQVNSPDLGLSMAVLQ
MQFNSAEREANGILPGHGVNGLINGKTNSHKSPPSPAVLLSPTKEPPPLLAKPKLGFPKK
AGRTARIASDEEIQGTKDAVIQDLERKLRFKEDLLNNGQPRLTYEERMARRLLGADSATV
FHVQEPEEEAANQDIGSPHASVGSPLEGQKEYKVSSCEQRLISEIEYRLERSPVDESGDD
IQHGDAPVENGVAPFFETKLKHFKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDH
YIIQRDLDGTCSLHTAASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGRSPRSPSG
HPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTIQEGKLCRMDCKVSGLPTPDLS
WQLDGKPIRPDSAHKMLVRENGVHSLIIEPVTARDAGIYTCTATNRAGQNSFSLELVVAA
KEAHKPPVFLEKLQNTGVADGYPVRLECRVSGVPPPQIFWKKENESLTHSTDRVSMHQDN
YGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQPQSTKPKKVRPSASR
YAALSDQGLDIRAAFQPEASPSHLTLSPGLVESEDL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacttcctcccatgactccttctacgattccctgtcagacatgcaggaagaa
ggcaagcacactgatttcttcccagtgctgtctgctttcctcagtcaggaagagataaac
aagagtcttgacctggctcagagggccatagccgactccgaaaccgaggactgcgactcg
gagaaggagatctcacagattttcaacccttcctgtggaagcccctgtgcaaaccgctcc
catccagaagcccagctggtgacgcggagctctccggtcagtccacaggatcccaggctg
gcacctgcgcagcctccggcagggcaggctaacagtaccgcttcacctgctcccaggagg
aaaccagccatgtcgccactgctggctagccccagctacatccggagcctgcgcaaggct
gagaagcgtagcggaaaagcaaccggctgtggcgtgaagcccaagcccacccgtgccggg
aaagctggtcctcagggccagctgagtgacaaggcagccaatttgatcgaggagctcacc
tccatcttcagggaggcctcaaagccaaggaccagaagccccaatggggagtcctcctcg
cctgacagtggttacctctctcctaagaaccagccgacagccttgatgagtgcgtcggcc
agccagagccccactggcgatcaccagggcctggaagcagaggtcaaggagcctgaggcc
aggcctgtctacaaggtgcaccaggacggagccgcaccttgcgccagcatcccacgccct
ctaccctccgctgcatcctatcttctgtctgcaccccggttcacgcagaagctcaggagc
caagaagtagcagagggaagtcgcgtttatttggtgtgtagagtcactggaaatccaatg
ccgcatgtcaggtggttctgtgaggataaggagctacacaactctccagatattcaaatc
cactgtgagggcggagacctccatactctcactatagcagaggcgtttgaggacgacaca
ggtcgctacacctgcctggccacgaaccctagtggctcagacagtacttccgccgaggtg
ttcattgaaggtgccagttcaactgactctgacagtgaaagtttggctttcaaagcaaag
actggagctatgccacaagctcaaaagaaaacgacttctgtctccttaaccatcgggtca
tcatccccaaagacaggcgtgactacagccgtcatccagcccctgtctgtcccggttcag
caggttcacagtccaactccgtacctctgccgatctgacggaaccgctgctgcctacttt
cctcctgtttttacaaaggagctgcaaaacacggcagcatccgagggccaagtggtggtc
ttggagtgtcgggtccggggggcaccccctctgcaggtccagtggttccgccaagggagt
gaaatccaggactcaccagatttcaggattctgcagaaaaaacctagatctacagctgaa
cctgaggagatctgtaccctggttatcgcagagactttccctgaagatgcagggatcttt
acatgctcggcaagaaatgattacggatctgcaactagcactgctcagctggttgtcacc
tctgccaactctgaaaactgtagctatgattcagtaggcgaatccaacaatgatttccag
cactttccacctccgccaccggtcttggagacaaattcctttgaattggcttcaaagaaa
ccatctgagatccagcaggtgaacagccctgacttgggacttagtatggcagtccttcaa
atgcaattcaactctgctgagagggaggctaatggcatccttcctggccatggagtcaac
ggcctgattaatggcaaaaccaacagtcataaatctcctccatcgccagctgtcctgctc
tcgcccacgaaggagccaccccctctgcttgccaaaccgaaactggggttcccaaagaag
gctggcaggacagcaaggatagcctctgacgaggagatccagggcacaaaggatgctgtc
atccaagacttggaacgcaaacttcgcttcaaggaggacctcctgaacaatgggcagccg
aggttaacttacgaggagaggatggctcggcggctgctgggtgctgacagtgccaccgtc
tttcacgttcaggagccagaagaggaagctgctaatcaggacatcgggtctcctcacgct
tctgtagggagtcctctggaaggtcaaaaggaatacaaagtgtccagctgtgagcagaga
ctcatcagtgaaatagagtacaggctagaaaggtctcctgtggatgaatcaggcgatgac
attcaacatggagatgcacctgtggaaaacggagtggccccgttcttcgagacgaagctg
aaacacttcaaaatctttgaggggatgcctgtgactttcacatgcagagtggctggaaac
ccaaagccaaagatttattggtttaaagatgggaagcagatctcgccgaagagtgatcac
tatatcattcagagagacctcgatgggacctgctctctgcacaccgcggcctccacccta
gacgacgacgggaattacaccatcatggctgccaacccgcagggccgcatcagctgcacc
ggccggctgatggtccaggcagtcaaccaaagaggtcgcagtccccgctccccctcaggc
catcctcatgtcagaaggcctcgctctcggtccagggacagcggggacgagaacgaaccg
attcaggagcgattcttcagacctcatttcttgcaagctcctggtgacctgaccattcaa
gagggcaaactctgcagaatggattgcaaggtcagcgggttgccaactccagacctgagc
tggcaacttgacgggaagcctatccgtcctgacagcgctcacaagatgctggtgcgtgag
aacggggtgcactctctgatcatagagcccgtcacggcgcgggacgccggcatctacacc
tgcacagccaccaaccgagcagggcagaactccttcagcctggagcttgtggttgctgct
aaagaagcgcacaaaccccctgtgtttctggagaagctgcagaacacaggagtcgctgac
gggtacccggtacggctggaatgtcgtgtttcaggagtgccaccgccccagatattctgg
aagaaagagaatgagtcactcacacacagcactgaccgagtgagcatgcaccaggacaac
tacggctacatctgcctgctcattcagggagccacaaaggaggacgccggctggtatacc
gtgtccgccaagaacgaggccggcatcgtgtcctgcactgccaggctggacgtttacacc
cagtggcatcaacagccacagagcacaaagcccaaaaaagtccggccctcagccagccgc
tacgcagcactttcggaccaggggctagacatcagagcagcgttccagcccgaggccagc
ccatctcacctgacgctgagtcccggcttggtggaaagtgaggacctgtga
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integrated database retrieval system
