Ochotona princeps (American pika): 101524353
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Entry
101524353 CDS
T07609
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04721
Synaptic vesicle cycle
opi04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
101524353 (SLC6A4)
04721 Synaptic vesicle cycle
101524353 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
101524353 (SLC6A4)
Transporters [BR:
opi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101524353 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
101524353
NCBI-ProteinID:
XP_004593996
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Position
19:17698258..17725922
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AA seq
627 aa
AA seq
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METTPLNSQTACPAGQDREDCREDAVLHKGVPADKAESSHMSNGYSGVPSPGAGDDTGRA
ILAASTTLVAEAQGERETWSKKVDFLLSVVGYAVDLGNVWRFPYICYQNGGGAFLIPYTI
MAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGFAICIIAFYIASYYNTIMAWA
LYYLISSFTDQLPWTSCQNTWNTGNCTNYFSEDNVTWTLHSTSPAEEFYTRHVLQIHRSK
GLQALGGISWQLALCILLIFTVIYFSIWKGVKSSGKVVWVTATFPYIILSILLVRGATLP
GAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALV
TSVVNCGTSFVSGFVIFTVLGYMAEMRNEEVSEVAKDAGPSLLFITYAEAIANMPASTFF
AIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLLVVVVCFFGSLMTLTF
GGAYVVKLLEEYATGPAVLTVALIEVVAVSWFYGISQFCSDVKEMLGFSPGWFWRICWVA
ISPVFLLFIIGSFLMSPPQLRLFQYNYPHWSIILGYCIGTSSIICIPMYIIYRLIVTPGT
FKERIIKSITPETPTEIPCGDIRLNAM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccctgaattcccagacggcgtgcccggcgggccaagacagagaggac
tgtcgagaagatgccgtgctccacaagggcgtgcctgcagacaaagcagagtcaagccac
atgtccaatgggtactcaggggttcccagccctggggcaggagatgacactgggcgtgcc
atcttggctgccagcaccaccctggtggctgaggctcaaggagaacgggagacctggagc
aagaaggtggatttcctcctctcggtcgttggttatgctgtggacctgggcaatgtgtgg
cgctttccctacatatgttaccagaatggaggaggtgcattcctcatcccctacaccatc
atggccatttttggggggatcccactgttctacatggagcttgcgctgggccagtaccac
cggaatggatgcatttccatatggaggaaaatctgcccaattttcaaagggattgggttt
gccatctgcatcattgccttttacattgcctcctactacaacaccatcatggcctgggca
ctctactacctcatctcctccttcacggaccagctgccctggactagctgccagaacacc
tggaacactggcaactgcaccaactacttctctgaggacaatgtcacgtggacactccac
tccacgtccccagccgaggagttctacacgcgccacgtcctgcagatccaccggtcaaag
ggcctccaggccctgggcggcatcagctggcagctggctctctgcatcctgctcatcttc
accgtgatttacttcagcatctggaaaggtgtcaaaagctccggcaaggtggtgtgggtg
acagccacgttcccatacatcatcctgtccatcctattggtgaggggcgccactctccca
ggagcctggagaggtgttctcttctacctgaagcccaactggcagaagctcctggagacg
ggggtatgggtggatgccgctgctcagatcttcttctctctcggcccaggctttggggtc
ctgttggcttttgcaagctacaacaaattcaacaacaactgctatcaagatgccctggtt
accagcgtggtgaactgcgggacaagtttcgtgtcaggattcgtcatcttcacggtgctg
gggtacatggcagagatgaggaatgaagaggtgtctgaggtggccaaagatgcaggcccc
agtctcctcttcatcacatacgcagaagccatcgccaacatgccagcatctactttcttc
gccatcatcttcttcctgatgttgatcactctgggcctggacagcacgtttgcaggcctg
gaaggggtgatcacggcagtgctggatgagtttccacacatctgggccaagcgccgggag
tggtttgtgctcctggtggtcgttgtctgcttcttcggatccctgatgaccctgactttt
ggaggggcctacgtggtgaagctgctggaggagtacgccacagggcccgcggtgctcacc
gtcgcactcatcgaagtagttgctgtgtcctggttctacggcatcagtcagttctgcagt
gacgtgaaggagatgctgggcttcagccccggatggttctggagaatctgctgggtcgcc
atcagccctgtctttctcttgtttatcatcggcagttttttgatgagtccaccacagcta
cgacttttccagtataattatccccactggagtatcatcctgggttactgcataggaact
tcatctatcatctgcatccccatgtatatcatttaccggctgattgtcactccagggacg
tttaaagagcgtatcatcaaaagtatcactccagaaacaccaacagaaattccctgtgga
gacatccgcttgaacgccatgtag
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