Ochotona princeps (American pika): 101526017
Help
Entry
101526017 CDS
T07609
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X2
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04014
Ras signaling pathway
opi04015
Rap1 signaling pathway
opi04020
Calcium signaling pathway
opi04024
cAMP signaling pathway
opi04080
Neuroactive ligand-receptor interaction
opi04713
Circadian entrainment
opi04720
Long-term potentiation
opi04724
Glutamatergic synapse
opi05010
Alzheimer disease
opi05014
Amyotrophic lateral sclerosis
opi05016
Huntington disease
opi05017
Spinocerebellar ataxia
opi05020
Prion disease
opi05022
Pathways of neurodegeneration - multiple diseases
opi05030
Cocaine addiction
opi05031
Amphetamine addiction
opi05033
Nicotine addiction
opi05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
101526017 (GRIN1)
04015 Rap1 signaling pathway
101526017 (GRIN1)
04020 Calcium signaling pathway
101526017 (GRIN1)
04024 cAMP signaling pathway
101526017 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101526017 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101526017 (GRIN1)
04720 Long-term potentiation
101526017 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
101526017 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101526017 (GRIN1)
05014 Amyotrophic lateral sclerosis
101526017 (GRIN1)
05016 Huntington disease
101526017 (GRIN1)
05017 Spinocerebellar ataxia
101526017 (GRIN1)
05020 Prion disease
101526017 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
101526017 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
101526017 (GRIN1)
05031 Amphetamine addiction
101526017 (GRIN1)
05033 Nicotine addiction
101526017 (GRIN1)
05034 Alcoholism
101526017 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101526017 (GRIN1)
Ion channels [BR:
opi04040
]
Ligand-gated channels
Glutamate (ionotropic)
101526017 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
101526017
NCBI-ProteinID:
XP_004593483
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSTMRLLTLALLFSCSVARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYESLDQLPYDHKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGVYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEESTVNGDPVKKVICTGPNDTSPGGPRHTVPQCCYGFC
VDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTQYHPSDITGPLNLSDPSVSTVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgaccctggccctgctcttctcctgctccgtcgcccgcgcc
gcctgcgaccccaagatcgtcaacattggcgcggtgctgagcacacgcaagcacgagcag
atgttccgcgaggcggtgaaccaagccaacaagcgccacggctcctggaagatccagctg
aacgccacctccgtcacgcacaaacccaacgccatccagatggccctgtcggtgtgcgag
gacctcatctctagccaggtttatgccatcctcgttagccacccacccacccccaacgac
cacttcacccccacccccgtctcctacacagctggcttctaccggatccctgtgctggga
ctgaccacacgcatgtctatctactctgacaagagcatccacctgagcttcctgcgcacc
gtgccgccctactctcatcagtcgagcgtgtggtttgagatgatgcgcgtctacagctgg
aaccacgtgatcctgctggtcagcgatgaccacgagggccgcgcggcgcagaaacgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaagcctcgac
caactgccctatgaccacaagcgcggacccaaggcagagaaggtgctgcagttcgacccg
ggaaccaagaatgtgacagctctgctgatggaggcacgggagctggaggcccgggtcatc
atcctctcggccagtgaggacgacgcggccactgtgtaccgtgcagctgccatgctgaac
atgactggctcgggctacgtgtggctggtgggcgagcgtgagatctcggggaacgccctg
cgctacgccccagatggcatcatcgggctgcagctcatcaatggcaagaatgagtctgca
cacatcagtgacgcagtgggcgtggtggcacaggcggtgcacgagctgctggagaaggag
aacatcacagacccgccacgcggctgcgtgggcaacaccaacatctggaagactgggcca
ctcttcaagagggtgctgatgtcctccaagtacgcggatggcgtcaccggccgcgtggag
ttcaacgaggatggtgaccgcaagttcgccaactacagcatcatgaacctgcagaaccgg
aagctggtgcaagtgggcgtctacaacggcacccacgtcatccccaatgacaggaagatc
atctggcccggcggcgagaccgagaagcctcggggctaccagatgtccaccagactgaag
atagttaccatacaccaagagcccttcgtgtacgtgaagcctacgctgagcgacggcacg
tgcaaggaggagtccactgtgaacggcgacccggtcaagaaggtcatctgcactgggccc
aacgacacgtcgccgggcgggccgcgccacacggtgccacagtgctgctatggcttctgc
gtggacctgctcatcaagctggcacgcaccatgaatttcacctacgaggtgcacctggtg
gctgacggcaagttcggcactcaggagcgggtaaacaacagcaacaagaaggagtggaac
gggatgatgggcgagctgctgagcgggcaggcggacatgatcgtggccccgctgaccatc
aacaacgagcgcgcccagtacatcgagttctccaagcccttcaagtaccagggcctgacc
atcctggtcaagaaggagatcccgcgcagcacgctggactcattcatgcagcccttccag
agcaccctgtggctgctcgtggggctgtcagtgcacgtggtggccgtgatgctgtacctg
ctggaccgcttcagccccttcggccggttcaaggtgaacagcgaggaggaggaggaggac
gcgctgaccctgtcctccgccatgtggttctcctggggtgtcctgcttaactctggcatc
ggggaaggcgcccctcggagcttctcagcacgcatcctgggcatggtgtgggccggcttc
gccatgatcatcgtggcctcctacaccgccaacctggcggccttccttgtgctggaccgg
cccgaggagcgcatcacgggcatcaacgacccgcggctgcggaacccatcggacaagttc
atctacgccacggtgaagcagagctcggtggacatctacttccggcggcaagtggagctc
agcaccatgtaccggcacatggagaaacacaactacgagagcgcggccgaggccatccag
gccgtgcgggacaacaaactgcatgccttcatctgggactctgccgtgctggagttcgag
gcgtcgcagaaatgtgacctggtgaccacgggcgagctcttcttccgctcgggcttcggc
attggcatgcgcaaggacagtccctggaagcagaacgtgtcactgtccattctcaagtcc
catgagaacggcttcatggaggacctggacaagacgtgggtgcggtaccaggagtgtgac
tcccgcagcaacgccccggcaaccctcacctttgagaacatggcaggggtcttcatgctg
gtggccgggggcatcgtggccggcatcttcctgatcttcatcgagattgcctacaagcga
cacaaagatgcgcgccggaagcagatgcagctggccttcgcggccgtgaacgtgtggcgg
aagaacctgcaggatagaaagagtggtagagcagagcctgaccctaaaaagaaagccact
tttagggctatcacgtccaccctggcttccagcttcaagagacgtaggtcctccaaagat
acgcagtaccacccctctgatatcacgggcccgctcaacctctcagatccctcggtcagc
accgtggtgtga
DBGET
integrated database retrieval system
