Obesumbacterium proteus: DSM2777_03230
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Entry
DSM2777_03230 CDS
T04310
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
opo
Obesumbacterium proteus
Pathway
opo00540
Lipopolysaccharide biosynthesis
opo01100
Metabolic pathways
opo01250
Biosynthesis of nucleotide sugars
Module
opo_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
opo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DSM2777_03230 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
opo01005
]
DSM2777_03230 (rfaD)
Enzymes [BR:
opo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DSM2777_03230 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
opo01005
]
Core region
DSM2777_03230 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AMO80146
UniProt:
A0A4Q9D6K0
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All DBs
Position
complement(652663..653592)
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AA seq
309 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNNNGYSDILVVDNLKDGTKFVNLVDLEITDYMDKEDFIASV
VAGDDFGDIEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHFCLERQIPFLYASSAATY
GLTEQFTEEREFEGPLNVYGYSKFLFDQYVRQILPEAESQICGFRYFNVYGPREGHKGSM
ASVAFHLNNQINNGEDPKLFEGSDGFKRDFIYVGDVADVNLWFWQKGISGIFNCGTGRAE
SFQAVADAVVAYHQKGSISYIPFPDKLKGRYQGFTKADTTKLRAAGYDKPFKTVAEGVSE
YLAWLNNKA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaaccggcggcgctggcatgatcggcagcaacatcgttaaggcactgaat
aataacggctatagcgacattctcgtggtcgataaccttaaagacggcactaaatttgtt
aatttggtcgatttagaaattaccgactacatggataaagaagattttattgccagcgtt
gttgctggggatgatttcggcgatatcgaagccgttttccatgaaggtgcgtgctcatcc
accaccgagtgggatggcaagtatatgatggataacaactatcagtactctaaggaactg
ctgcatttctgcttggaacgccaaatcccattcttgtacgcatcgtctgccgccacctac
ggtttaactgagcaatttaccgaagaacgcgaattcgaaggaccattaaacgtttacggt
tactccaaattcctgttcgatcagtatgttcgccagatcctgccagaagcagaatctcag
atttgtggcttccgctacttcaacgtttatggcccacgtgaaggtcataaaggcagcatg
gcaagcgttgcattccatctgaataaccaaatcaacaacggtgaagatccaaaattgttt
gaaggcagcgatggttttaaacgtgacttcatctatgtgggcgacgttgctgatgtgaac
ctgtggttctggcagaaaggcatctctggcatctttaactgcggtactggccgtgcggaa
tcattccaagccgtcgcagacgcggttgttgcctatcaccaaaaaggcagcatcagctac
attcctttcccagacaaattgaaaggccgctatcagggtttcaccaaagccgataccacc
aaattgcgtgcagctggctatgacaagccgtttaaaaccgttgctgaaggcgtgagcgaa
tatcttgcgtggctgaataacaaagcctaa
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