Ornithobacterium rhinotracheale ORT-UMN 88: Q785_06505
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Entry
Q785_06505 CDS
T03303
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Pathway
ori03030
DNA replication
ori03410
Base excision repair
ori03420
Nucleotide excision repair
ori03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q785_06505
03410 Base excision repair
Q785_06505
03420 Nucleotide excision repair
Q785_06505
03440 Homologous recombination
Q785_06505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ori03032
]
Q785_06505
03400 DNA repair and recombination proteins [BR:
ori03400
]
Q785_06505
Enzymes [BR:
ori01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q785_06505
DNA replication proteins [BR:
ori03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Q785_06505
DNA repair and recombination proteins [BR:
ori03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Q785_06505
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q785_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
HHH_2
Polycystin_dom
RecR_HhH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AIP99397
LinkDB
All DBs
Position
complement(1300251..1303046)
Genome browser
AA seq
931 aa
AA seq
DB search
MSTLQDKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAIMGFMNSLLEVVKKEKPTHL
AVVFDVGKQNTLRHEYFPDYKATRDETPEGIKVAVPYIQEILRAMKIPVLYAEGYEADDV
IGTLAKKAEKDGFTTFMMTPDKDFAQLVSEHIKMYKPASRGGGIQIWGVKEVQENFGVKD
PKQIIDYLGMMGDSADNIPGIPGIGPKTAQKFIEKYGSMEGLYEHINDLKGKQKINVEEN
KEQAFLSKKLATILTDAPVEFDEESLIVEQPDFEKIKEIFTDLEFKRLTENLFRAYGLDS
PAEAEATVTAPTLFDQLEEEPSEENSAFKTIENQEHFYQLVDTTMGLKILVSKLLQQKQI
CLDCETTGLKALEANLVGMAFSYEAGKGYYVSFNQDEKETQEKIELLRPVLENPEILKIG
QNLKYDIKVLFKYNIQLAAPLYDTMVAHYLINPDMRHNMDILAETYLNYKPVSIESLIGK
KGKNQKSFDQVPLNEQTEYAVEDTDVTLQLKEVFKPKIEKIKAEKLFNEVEMPLVKVLAD
MEKEGIALDVPALAEISKELDSDMTELEKQIFEYAGEEFNLNSPKQLGEILFEKMELVKK
PKKTKTGQYSTSEDVLSKLSDKHPIIEQILEYRQLQKLKSTYVDSLPQEVSPITGRVHTS
FAQTVAATGRLASNNPNLQNIPIRTPRGQEVRKAFIAKDEQHVLIAADYSQIELRLIAGL
SQDPTMMASFNNGEDIHAATASKVFGVPLNEVTREQRSHAKTVNFGIIYGVSAFGLSEQT
SLSRGESKDLIDAYFETYPQLQKYIQDQIALARKQGYVETILGRRRYLRDINSNNYVVKS
HAERNAVNAPVQGSAADIIKLGMVKIHQRLKEENFQTKMLLQVHDELVFEAPKSEVEQVS
ALIKDTMEHAIAFNVPLVVECGVGKNWLEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacttcaagataaaagattatttttactcgacgcttatgctttaattttcaga
ggatactatgcctttattaaaaatccaagaatcaattccaaagggctaaatacttctgcc
attatgggatttatgaattcgcttttggaagtggtgaaaaaagaaaaacctacgcacctt
gccgtagtgtttgatgtcgggaaacaaaatactttaagacatgaatatttccctgactat
aaagctacgcgcgacgaaacacccgagggaattaaggttgccgtgccatacattcaggag
attttgcgtgcaatgaaaatccccgtgctctacgcagagggctatgaggcagacgatgta
attgggactttggctaaaaaagcggaaaaagatggatttaccacttttatgatgacgccc
gataaggattttgcccaattggtgagcgagcatatcaagatgtataaacctgcttcgcga
ggcgggggcattcagatttggggcgtgaaagaagtgcaagaaaattttggggtaaaagat
cccaaacaaatcattgattatctaggcatgatgggcgacagcgccgacaacattcctgga
atccctggcattggtcccaaaacggcacaaaaattcattgagaaatatggatcaatggaa
ggactttatgagcacatcaacgatctgaaagggaaacaaaaaataaatgttgaagaaaac
aaggaacaagcctttttgtctaaaaaattagccaccatcttgaccgacgcccctgtggag
tttgatgaagaatctttgattgtggaacaacctgattttgaaaaaattaaagaaatcttt
acggatttagaatttaaacgacttaccgaaaatttattccgtgcgtatggcttagattct
cctgccgaggcagaagctaccgtcactgcgcctactcttttcgaccaattggaagaagaa
ccaagcgaagaaaattcagcgtttaaaaccatcgaaaaccaagaacatttttaccaattg
gtggataccaccatgggattaaagattttggtgagcaaacttttacaacaaaaacaaatc
tgcctagattgcgaaaccacaggacttaaagctcttgaagcaaatctagtgggaatggcg
tttagctacgaggctggcaaaggctattatgtaagctttaatcaagacgaaaaagaaaca
caagagaagattgagcttttgcgccccgtactggaaaatcctgagattttaaaaatcggt
cagaatttaaaatatgacatcaaagtcttgtttaaatacaacattcagctggcggctccg
ctctacgataccatggtggcgcattacctcatcaatcccgacatgcgacacaacatggat
attctcgcagaaacttatttgaattataagcccgtgagcattgaatcgctcatcggaaaa
aaagggaaaaatcaaaaaagttttgaccaagtcccattgaacgagcaaacggaatatgcc
gtagaagacaccgatgtaactttgcaactcaaagaagtttttaagcctaaaatcgaaaaa
ataaaggctgaaaagttatttaacgaagtagagatgccactggtgaaagtgcttgccgac
atggaaaaagagggcattgcactagatgtgcctgctttggcagaaatttcaaaggagcta
gatagcgacatgaccgagctagagaaacagatttttgaatacgcaggcgaggaatttaac
ctaaattctccgaaacaattgggcgaaattctttttgaaaaaatggaattggtcaaaaaa
ccaaaaaaaaccaaaacagggcaatattctacctcagaagatgttttgtctaaactttct
gacaagcaccctatcattgagcaaattttggaataccgccaattgcaaaaattaaaatcc
acttatgtagacagtttgccacaagaagtgagccctatcacagggcgtgtgcataccagt
tttgcacaaacggtggcagctacggggcgtttggcgtccaataatccaaatttgcagaat
atcccgatccgcacgccacgcgggcaggaagtgcgcaaggcttttattgctaaagatgag
cagcatgtgctgattgcagccgattattctcaaattgaattaagactgattgcaggactg
agccaagacccaacgatgatggcgtcgtttaacaatggcgaagatattcacgcagcaacg
gcgtctaaggtgtttggcgttccgctaaatgaagtaacacgcgaacaacgaagccacgcc
aaaacggtgaattttgggattatttatggcgtttctgcctttgggctgagcgaacaaacg
agtctttctcgtggcgaatccaaagatttgattgatgcgtattttgaaacttatccgcaa
ttgcaaaaatacattcaagaccaaattgcactggcaaggaaacaaggttatgtagaaacg
attttgggcagacgccgctacttgcgcgacattaattctaataattatgtagtgaaaagc
cacgccgagcgaaacgccgtgaacgcgcccgtgcaaggtagtgcggcagacatcattaaa
ctagggatggtgaaaattcatcaacgattaaaagaggagaatttccaaaccaaaatgctc
ctgcaagtgcacgacgaattggtatttgaagcaccaaaatcagaagtggaacaagtttct
gccctcatcaaagacaccatggaacacgccatagcattcaatgtgccactcgtggtagaa
tgtggcgtaggcaaaaactggctggaggcgcattaa
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