Odobenus rosmarus divergens (Pacific walrus): 101377274
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Entry
101377274 CDS
T05148
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101377274 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oro03021
]
101377274 (POLR1A)
Enzymes [BR:
oro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101377274 (POLR1A)
Transcription machinery [BR:
oro03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101377274 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Lin-8
NOA36
Motif
Other DBs
NCBI-GeneID:
101377274
NCBI-ProteinID:
XP_004415461
UniProt:
A0A2U3X0D3
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPTAFEIQEELEQYTAKIVQNNLLGSHSAH
VKNVCESRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAMVHKKADQKDT
EPLGIEEAQMGKRGYLTPTSAQEHLTALWKNEGFFLNYLFSGLENVDMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVVAPAK
DEEKDSSVVLDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAHVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELLYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKINGKAWVQES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRHRVIEESARCGPRAVRAALNLPEAASYD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSKHS
NGLLRKGAFLNYSQRIQAAVKALNLEGGNQNGRSLGTHQILKMWSELDEQSRRKYQKKAA
PCPDPSLAVWRPDIYFASVSETFEKKMDDYSLEWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGDKQDKFQVYQLRFQ
FLPHAYYQQEKCLRPEDILHFVETRFFKILMESLRKKNNKASAFRSVNTRRATQQDLDNS
GESERNRGEQEGDEEEGPIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEVEADNADE
DMQEEELSAVNGAHEAREQDEEVGSGPEEDSPSAAPVTQPRKSTRSREPQGAEAVERRVQ
TVRESHPFIEDYQYDSEESLWCQVTVKLPLMKINFDMSSLVVSLAQSAVVYATKGITRCL
LNETTTKKNEKELVLNTEGINLPELFKYTEVLDLRRLYSNDIHAMASTYGIEAALRVIEK
EIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQ
ATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggaggctgcagggcatttccttcgggatgtat
tcggccgaagaactaaagaaattaagcgttaagtccattacaaaccctcgttacctggac
agcctggggaacccgtcggtgaacggcctgtacgatttagctttgggccctgcggattcc
aaagaggtgtgctccacctgcgtgcaggacttcaacaactgctctggccacctgggccac
attgagcttccgctcacggtgtacaaccctctcctctttgataaactctacctgctgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtgattcacctctta
gtctgccagctgcgagttctggaagtgggtgccctacaagcagtctacgagcttgagaga
attctgaacaggtttctagaagaaaatgctgatcctactgccttcgaaattcaggaagag
ttagaacagtacacggccaaaattgtacagaacaatctgttgggatcccacagtgcacac
gtgaaaaatgtttgtgagagcaggagcaaactcattgcttacttctggaaggcacatatg
acggccaagcggtgtccccactgcaagaccgggcggtcagttgtccgaaaggagcacaac
agcaagctgacagtcacgtacccagccatggttcacaagaaggctgaccagaaggacaca
gagcccctgggaattgaggaagctcagatgggaaaacgagggtacctaacacctaccagc
gcccaagaacatcttactgccctttggaagaatgaaggattctttctgaattaccttttt
tcgggactggaaaatgtcgacatggagtctagattcaatcccagtatgttctttttggat
ttcctggtggtgccaccctcaaggtatcgccctgtcaatcggctgggggaccagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggacatggttctgatccgaaaa
cttctggcattgatggcccaggaacaggagctgccatgtgaggtggtagcacctgccaag
gatgaggaaaaagactcttcagttgttctggaccgatcctttttgagtatgcttccaggc
cagtccctcacagacaaactgtacaacatttggattcgtcttcagagccacgtcaatatt
gtgtttgatagtgagatggacaaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggcttattccgaaaacacatgatgggcaagcgagtggactacgcg
gcccgttcggtcatctgcccagatatgtacattaacaccaacgaaattggaattcccatg
gtgtttgccacaaaattgacctaccctcagccagtcaccccctggaatgttcaggaactg
aggcaagcagtcatcaatggccccaatgtgcacccgggagcctccatggtcatcaatgag
gatggcagccgcacagccctgagtgccgtcgacctgacccagcgggaagctgtagccaaa
cagctcctgacaccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacatcctcctgctgaaccgacagcccaccctgcacagaccctct
atccaggcacaccatgcccgcatcctgcctgaagagaaagtcctgcggctccactatgcc
aactgcaaggcatataacgctgactttgatggagatgagatgaatgctcacttcccccag
agtgaacttggccgggccgaggcccatgtcctggcctgcacggatcagcagtaccttgtt
cccaaggatggccaaccattggcggggttgatccaagatcacatggtttcgggtgcaaac
atgaccattcgaggttgctttttcactcgggagcaatatatggagctgctataccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcca
ctgtggacaggaaagcaggttgtgtcaacactgctcataaacataatcccagaggaccac
atcccactgagcttatcgggaaaggcgaagatcaacggcaaagcctgggtgcaggagtcc
cctcggcctgttcctggctttaaccctgactccatgtgcgagtcccaggtgatcatcaga
gaaggggagctgctctgtggggtgctggacaaggcgcactacgggagctccgcctatggc
ctggtccactgctgctatgagatctatggcggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggtttcaccttgggggtggaa
gacattctggttaagccgaaggcggatgtgaagagacacagggtcatcgaagagtccgcc
cgctgcgggccgcgggctgtcagggctgcgttaaacctgccagaagcagcttcatatgat
gaggtccgaggcaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccatttggcctgcacagacagttcccagaaaacaacttgcagatgatggtgcagtct
ggagccaaaggttctactgtgaacaccatgcagatctcatgcctgctgggccaaatcgaa
ttggaaggtcggagaccacccttgatggcatctggcaagtcattgccctgctttgagcct
tatgagttcacccccagggccggtggtttcgtcactggcagattcctcactggcatcaag
cctcctgagttcttctttcactgcatggccgggcgagagggtctagtggacactgctgtg
aaaaccagccgctccggctatctccaaaggtgcatcatcaagcacttggagggactggtc
gtccagtatgacctgactgtccgcgacagtgatggcagcgtggtacagttcctgtatggg
gaggacggcctggacatccccaagacgcagttcctgcagcccaagcagttccccttcctt
gccagcaactacgaggtgataatgaaatcgaagcatctgcatgaagttttatccagagca
gatccccaaaaagctctccgtcacttcagagccatcaaaaaatggcaaagcaagcattcc
aacggcctgctgagaaaaggcgccttcttgaattattcacagagaattcaggcagctgtg
aaggccttgaaccttgagggtgggaaccagaatggccgcagccttgggactcatcagatc
ttgaagatgtggagtgagttagatgagcagagtcgaaggaaataccagaagaaggcagct
ccttgtcctgaccctagtctggctgtttggcgcccagacatctactttgcatcggtgtca
gaaacatttgaaaaaaagatggatgactacagtctcgagtgggcatctcaagcagagaag
agttacgagaaatcagagctttctcttgacaggttgaggaccctgctgcagctgaagtgg
cagcgctcactgtgtgacccgggtgaggccgtgggcctgctggccgcccagagcattggg
gagccctccacgcagatgaccctgaacaccttccactttgctggcagaggcgagatgaac
gtcaccctgggcatcccgagattgagggagattctcatggtggcgagtgccaacatcaag
acgcccatgatgagcgtgcccgtgttcaacaccaagaaagcactgaagagagtgaaaagc
ctgaagaagcagctcaccagagtatgcttaggggaggtgttagagaaaattgatgtccag
gagtcgttctgtatcggagacaaacaggacaagtttcaggtgtaccagttgaggtttcag
ttcctgccacatgcgtattaccagcaggagaagtgcctgagacctgaggacatcctgcac
tttgtggaaacaaggttctttaagattctgatggaatccctcagaaagaagaataataaa
gcctcagctttcagaagcgttaacactcggagagctacccagcaggatctagacaactct
ggggagtcggagaggaatcggggagaacaggagggcgacgaggaagaggggcccattgtg
gacgctgaggctgaggagggggacgctgatgcttctgatgccaaacgcaaggagaaacaa
gaagaggaggtcgattatgagagcgaggaggaggaggttgaggcggataacgccgatgaa
gacatgcaggaggaagagctcagcgctgtgaacggtgctcacgaggcccgggagcaggat
gaagaggtgggctcaggccccgaggaggactcgccctctgccgcccccgtcacccagccc
cggaagtccacccgcagcagagagccccagggagctgaggccgtggagcgccgggtgcag
acggtgcgcgagtcacacccgttcatagaggactaccagtatgactccgaggagagcctg
tggtgccaggtgacagtgaagctccctctgatgaagattaactttgacatgagctccctg
gtagtgtcgctggcccagagtgctgttgtctacgcgaccaagggcatcacaaggtgcctc
ctcaatgaaaccaccaccaagaagaatgagaaggaacttgtcttaaacactgaaggaatc
aacctgccggagctgttcaaatacactgaggttctggacttgcgccgcctctattccaat
gacatccacgccatggccagcacctacggcatcgaggccgcactgcgggtgatcgagaag
gagatcagggacgtgtttgctgtgtatggcattgcggtcgatccccgccatctctccctg
gtcgccgactatatgtgcttcgagggcgtgtacaagccgttgaatcgctttgggatccga
tcaaactcctcccctctgcaacagatgacatttgaaaccagcttccagtttctgaagcag
gctaccatgctgggatcgcacgatgagctgaggtccccttccgcctgcctcgtggtcggg
aaagtcgtcaggggcgggacaggcctgttcgagctcaagcagcccctgagatag
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integrated database retrieval system
