Oryza sativa japonica (Japanese rice) (RefSeq): 4330260
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Entry
4330260 CDS
T01015
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00900
Terpenoid backbone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
4330260
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
osa01006
]
4330260
Enzymes [BR:
osa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
4330260
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
4330260
2.5.1.29 geranylgeranyl diphosphate synthase
4330260
Prenyltransferases [BR:
osa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
4330260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
4330260
NCBI-ProteinID:
XP_015626863
UniProt:
Q6ET88
A0A0P0VMU3
Structure
PDB
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All DBs
Position
2:complement(27120990..27124478)
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AA seq
342 aa
AA seq
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MALSSFSMSLPFAKLPSTSKSTRFLPIRASSAAAAASPSFDLRLYWTSLIADVEAELDAA
MPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAALPAAVALEMLH
AASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPH
AVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFGEMAECSAACGAML
GGAGPDEEAALRRYGRTIGVLYQLVDDIRSASGNGKMRSNASVLRALGMDRALGIVEELK
AQAKMEADRFGDKYGERVLPLYSFVDYAVERGFELQDAATTP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcctccttctccatgtccctccccttcgccaagctgccttccacctccaaa
tccacccgcttccttcccatccgggcctcctctgccgccgccgccgcctccccttccttc
gatttgcgcctctattggacatccctgatcgccgatgtggaggccgagctcgacgccgcg
atgcccatccgcacgccggagagaatccactccgccatgcgctacgccgtcctcccgggc
gccggcaacgagggcaccgccaagcgcgcgcccccggtcctctgcgtcgccgcctgcgag
ctcctcggcgcgccgcgcgaggccgcgctccccgccgctgtggccctcgagatgctccac
gcggcgtcgctcgtgcacgacgacctcccatgcttcgacgccgcgcccacccgccgcggg
cgcccctccacccacgccgcctacggcaccgacatggccgtcctcgccggggacgcgctc
ttccccctcgcctacacccacgtcatcgcccacactccgtcgcccgaccccgtaccccac
gccgtcctcctccgcgtcctcggggagctagcgcgcgccgtgggatccacaggcatggcg
gccggccaattcctcgacctcgccggcgccaccgccctcggcgaggccgaggtcatgaag
gttctgacgaagaagttcggcgagatggcggagtgctccgccgcctgcggcgccatgctg
ggaggcgcggggcccgacgaggaggccgcgctgcggcgctacggccgcaccatcggcgtc
ctgtaccagctcgtcgacgacatccggagcgcgtcgggcaacggcaagatgaggagcaat
gccagcgtcctgcgcgcgctgggcatggatcgagcgctcggcatcgtagaggagctcaaa
gcgcaggccaagatggaggccgacaggttcggtgacaagtatggcgaaagggtgcttccc
ttgtacagcttcgtggactatgcggtggagaggggattcgagctgcaggatgcagctaca
acgccgtag
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