Oryza sativa japonica (Japanese rice) (RefSeq): 4335090
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Entry
4335090 CDS
T01015
Name
(RefSeq) syn-copalyl diphosphate synthase isoform X1
KO
K14043
syn-copalyl-diphosphate synthase [EC:
5.5.1.14
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00904
Diterpenoid biosynthesis
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
4335090
Enzymes [BR:
osa01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.14 syn-copalyl-diphosphate synthase
4335090
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GFIT
Motif
Pfam:
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
4335090
NCBI-ProteinID:
XP_015637092
UniProt:
Q0JF02
Structure
PDB
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Position
4:5318061..5326426
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AA seq
767 aa
AA seq
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MPVFTASFQCVTLFGQPASAADAQPLLQGQRPFLHLHARRRRPCGPMLISKSPPYPASEE
TREWEADGQHEHTDELRETTTTMIDGIRTALRSIGEGEISISAYDTSLVALLKRLDGGDG
PQFPSTIDWIVQNQLPDGSWGDASFFMMGDRIMSTLACVVALKSWNIHTDKCERGLLFIQ
ENMWRLAHEEEDWMLVGFEIALPSLLDMAKDLDLDIPYDEPALKAIYAERERKLAKIPRD
VLHSMPTTLLHSLEGMVDLDWEKLLKLRCLDGSFHCSPASTATAFQQTGDQKCFEYLDGI
VKKFNGGVPCIYPLDVYERLWAVDRLTRLGISRHFTSEIEDCLDYIFRNWTPDGLAHTKN
CPVKDIDDTAMGFRLLRLYGYQVDPCVLKKFEKDGKFFCLHGESNPSSVTPMYNTYRASQ
LKFPGDDGVLGRAEVFCRSFLQDRRGSNRMKDKWAIAKDIPGEVEYAMDYPWKASLPRIE
TRLYLDQYGGSGDVWIGKVLHRMTLFCNDLYLKAAKADFSNFQKECRVELNGLRRWYLRS
NLEKFGGTDPQTTLMTSYFLASANIFEANRAAERLGWARVALLADAVSSHFRRIGGPKNS
TSNLEELISLVPFDDAYSGSLREAWKQWLMAWTAKESSQESIEGDTAILLVRAIEIFGGR
HVLTGQRPDLWEYSQLEQLTSSICCKLSRRVLAQENGESTEKVEEIDQQVDLEMQELTRR
VLQGCSAINRLTRETFLHVVKSFCYVAYCSPETIDSHIDKVIFQDVI
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcttcactgcatcattccagtgtgtcaccttgtttgggcagccagcatcggcg
gccgacgcccagccattgctgcaagggcaacggccgttcctacaccttcacgctcgccgc
cgtcgaccatgcgggcccatgctaataagcaaatcaccgccgtacccggcctcggaagaa
acacgcgaatgggaagcagatggacaacatgaacacacggatgaactaagagagacgacg
acaaccatgatcgatggcatcaggacagcactgagatcaatcggagagggagagattagc
atctcagcctatgacacttcgttggttgcccttctgaagaggctagatgggggtgatggt
cctcagttcccatcaaccatcgactggatcgttcagaatcagctaccggatggttcatgg
ggtgatgcctccttcttcatgatgggagaccggatcatgagcaccctcgcttgtgttgta
gcgttgaagtcatggaacatccacaccgataaatgcgagagaggtttgttgtttatccaa
gaaaatatgtggaggttggcccatgaggaagaagactggatgctagttggatttgagatt
gccttgccctcgctcctagacatggctaaggacctggatcttgacatcccttacgatgag
ccagccttgaaagcaatatatgccgagagagaaaggaagcttgccaagattccaagagac
gtgctacactctatgccaacaactttacttcatagccttgagggaatggttgacttggac
tgggaaaagctcctcaagctccggtgtctcgatgggtccttccattgctcccctgcttcg
acggctactgctttccagcaaacaggagaccagaaatgctttgaatacctcgatggaatc
gtcaaaaagttcaatggaggagttccctgtatctaccctttggatgtgtacgaacgctta
tgggccgtcgataggctgacgaggctgggcatatcaaggcacttcacaagtgaaattgag
gattgcttagactacattttcaggaactggactccagatggattagctcacacaaagaac
tgcccggtaaaggatatcgatgacacggccatgggtttccgtctcctccgactttacgga
taccaagtcgacccatgtgtgttgaagaagttcgaaaaggatggcaagttcttctgcttg
cacggggagtccaacccatcctctgtcaccccaatgtacaacacttaccgggcctcccag
ctcaaatttcctggcgatgacggtgtccttgggcgagctgaggtgttttgccgctcattc
ctccaagacaggagaggctcaaacagaatgaaggacaagtgggccatcgccaaggatatc
ccaggcgaggttgagtatgctatggactacccatggaaagcaagtttaccgcgtattgaa
acaaggttgtacttggatcaatatggaggtagtggcgatgtatggattgggaaggtcctg
cacaggatgactcttttctgcaacgacctgtacctcaaggcagctaaagctgacttcagt
aatttccagaaagaatgccgagttgagttgaatggccttagaaggtggtacttgaggagt
aatctggagaagtttggagggactgatccacagactacactgatgacatcctacttctta
gcttcagccaacatcttcgaggcaaaccgagcagcggaacgtcttggatgggctcgcgta
gcgttgcttgccgatgccgtctcctctcacttcaggagaatcgggggaccaaaaaattcg
accagcaatcttgaagagcttatcagccttgttccttttgacgacgcttattctggcagt
cttcgtgaagcttggaagcagtggttgatggcatggactgcaaaggagagcagccaggag
tcaattgaaggggacacggcaatattgttggttcgtgccatcgagatttttggaggacgg
catgttttgaccgggcaaagaccggacctttgggagtattcccagctcgagcagctcacc
tcctccatctgctgcaaactttccaggagggttcttgcccaggagaatggggaaagtacg
gagaaagttgaggagatagaccagcaagtggatttggagatgcaggaattgactcggcgc
gttctacagggctgcagcgctattaacagactaacccgggagacgtttctccatgtggtg
aagagcttctgctatgtcgcctactgctcacctgagacaattgatagccacatcgacaag
gtcatattccaagatgtgatttag
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