Oryza sativa japonica (Japanese rice) (RefSeq): 4341844
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Entry
4341844 CDS
T01015
Name
(RefSeq) solanesyl-diphosphate synthase 1, mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00900
Terpenoid backbone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
4341844
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
osa01006
]
4341844
Enzymes [BR:
osa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
4341844
Prenyltransferases [BR:
osa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
4341844
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
GP24_25
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
4341844
NCBI-ProteinID:
XP_015644451
UniProt:
Q653T6
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All DBs
Position
6:complement(28191067..28196489)
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AA seq
430 aa
AA seq
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MSWRWALARRVAALGATSGGGDGATAQAQRLFSSAAALLGRHPPPPSPPHYQIRSKVVGC
RGATFVSSRWLHDAQYQVRQDGLSRSEEQQDPFELVADELSLLANRLRSMVAAEVPKLAS
AAEYFFKVGAEGKRFRPTVLLLMASALKFPLSDSTEVGVLTILANKLRTRQQNIAEITEM
IHVASLLHDDVLDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAALGNTEVVSLM
ATAVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAVAILAGHTADVSML
AYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLYAMEEFPQLHEVVD
RGFDNPANVELALDYLQKSRGIEKTKELAREHANRAIKAIEALPDSDDEDVLTSRRALID
ITERVITRTK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggcggtgggctctcgcgcggcgcgtcgccgcgctgggcgcgacgagcggcggt
ggggacggcgccaccgcccaggcgcagcggctcttctcctcggcggctgccctcctcggg
aggcaccctccaccgccgtcgccgccgcactaccagattcggagcaaggtggtgggttgc
agaggagctactttcgtgagctcgcgatggttacatgatgctcagtaccaggttcgccag
gatgggttatcaaggtctgaggaacagcaggatccatttgagttggttgctgatgagttg
tcacttcttgcaaataggctacgatccatggtagctgctgaggtccccaaactggcatca
gctgctgagtatttttttaaggtgggagctgagggtaaaagattcagacccacggtatta
ttgttgatggcatcagctctgaaattccccttatcagattcaacagaagtgggagtttta
actatactggcaaataagctccgcacgagacagcaaaatattgccgagataactgaaatg
attcatgttgcaagccttctacatgatgatgtactggatgatgctgacactaggcgtggc
gtcagttcgttgaattgcattatggggaacaagctttctgttctggctggtgacttcctc
ctgtctagagcatgtgtggcacttgcagcgcttgggaacacagaggtggtatctctaatg
gctactgctgtagaacatctagttactggtgaaaccatgcaaatctccacaagtagagag
caaaggcgaagtatggattactacttgcagaagacgtactacaaaacagcatcattgata
tcaaatagctgcaaggctgtcgctattcttgcagggcacactgctgatgtgtcaatgctc
gcatatgaatatggtcgaaacctgggtttagccttccagttgatcgacgatgttcttgat
ttcacaggcacttctgcatcccttgggaagggttcattaactgatatccgtcatggaatc
attaccgcacctatgctttatgcgatggaagaattcccacaactacatgaagttgttgac
aggggttttgacaatcctgcaaatgttgagcttgctcttgactacctacagaagagccgc
gggattgaaaagacgaaagagcttgcaagagaacatgctaaccgtgcaatcaaagccata
gaagctctcccagacagcgatgatgaagatgttctgacatcaaggcgtgctcttattgac
atcacagagagagtcatcactagaacaaaatag
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