Oryza sativa japonica (Japanese rice) (RefSeq): 4342575
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Entry
4342575 CDS
T01015
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00270
Cysteine and methionine metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
4342575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4342575
03032 DNA replication proteins [BR:
osa03032
]
4342575
03036 Chromosome and associated proteins [BR:
osa03036
]
4342575
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
osa02048
]
4342575
Enzymes [BR:
osa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
4342575
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
4342575
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
4342575
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
4342575
Prokaryotic defense system [BR:
osa02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
4342575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
DNA_pol3_a_NII
DUF4611
XAP5
Motif
Other DBs
NCBI-GeneID:
4342575
NCBI-ProteinID:
XP_015645008
UniProt:
B1Q3J6
LinkDB
All DBs
Position
7:4381088..4391957
Genome browser
AA seq
1529 aa
AA seq
DB search
MVKSPCSPVTTGKKRCRAKPQKKDEDTTDKGKLDEGPLDATKEMNGVGKGDSRAACKRPR
RAAACSDFKEKSVRLSDKSSVVATNGNKMEEEEMDAVKLTKLGPEVQRPCRKLIDFILHD
ADGKLQPFEMSEIDDFFITALIMPMDDDLEKDRQKGVRCEGFGRIEDWAISGYDEGTAVV
WVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGGNPNLGLEELLASVVR
SINAIKGYSGTLSKDFVISNGEFVYNQLIGLDETANTDDEKFATLPVLLALRDGCKSRVE
VSKLQPNISNGSLKINDAECKEVSEDDDEKLARLLQQEEEWKMMKQRGKRGTTSQKNVYI
KISEAEIANDYPLPAYYKPSSQEMDEYIFDSEDSFYSDVPVRILNNWALYNADSRLIPLE
LIPMKAGAENDIVVFGSGFMREDDGSCCSTAESAKLSSSSSSNHQDAGVSIYLSPIKEWV
IEFGGSMICITIRTDVAWYKLRQPTKQYAPWCEPVLKTARLSVSIITLLKEQSRASKLSF
ADVIKKVAEFDKGSPAFVSSNVALVERYIVVHGQIILQQFSDFPDETIRRSAFATGLLMK
MEQRRHTKLVMKKKVQVMRGENLNPSATMGPASRRKVMRATTTRLINRIWSDYYTHHFPE
DSKDADVNEAKEIDDELEENEDEDAEEEAQIEEENVSKTPPSTRSRKLVSQTCKEIRWEG
EAIGKTPSGEALYKCAYVRELRINLGRTVALEDDSGELVMCFVEYMFQKLNGAKMVHGRL
LQKGSETVLGNAANERDLFLTNECLEFELEDIKELMSVNLQSLPWGHKYRKENAEADRIE
RAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLGNGFCSSCQQKEPDCDELQIL
SKNSFIYRNITYNVNDYLYIRPDFFSQEEDRATFKGGRNVGLKPYVVCHLLDVHEPAGSR
KIHPASTKISVRRFYRPDDISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDIS
NSDVPVMVEHEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVD
SDKCTKVSKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAV
FVDNCNVILKAIMDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQG
FSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLL
EMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKY
YAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNTIALND
HISKEMNELNLIRCQRIPKRPGCDWHDLPDEKVKLSSGQLVDLIPWCLPNTAKRHNQWKG
LYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK
HRQIGNAVPPPLAFALGRKLKEAVDAKRQ
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaagtccgtgttctcccgttaccacaggaaagaaaaggtgcagagcaaagcca
caaaagaaggacgaagatacaactgataaaggcaaactggatgagggacctctggatgct
acaaaagagatgaatggagttggaaagggtgatagtcgtgctgcctgcaagaggccaagg
agagcagcagcgtgctctgatttcaaagagaaatctgtacgcttatctgataaatcctct
gtggtcgcgaccaatggaaataagatggaagaggaggaaatggatgccgtaaagctgaca
aaattaggaccagaagttcagcgaccttgtcggaaattgattgatttcatcttgcatgat
gctgatgggaaactacagccctttgaaatgtcagaaattgatgattttttcatcacagct
cttatcatgcccatggatgatgatttggaaaaagatcgtcaaaaaggagtgcgctgtgaa
ggatttgggcgaattgaggactgggcaatatctggttatgatgaaggtactgcagtagtc
tgggtctcaacagaagttgctgactacgaatgtgtgaagccagcaggcaattacaaatct
tactatgaccacttctatgagaaggcacaggtctgtgttgaagtttacagaaaacttgca
agatcagttggtgggaatcctaatctaggtctggaagaattgcttgctagtgttgttcgc
tctattaatgctatcaaaggttatagtggtacactgagcaaagactttgtgatctccaat
ggtgagtttgtatacaaccagcttattggattggatgagacagcaaacactgatgatgag
aagtttgcgacactaccagttcttcttgctctaagagatgggtgcaaatctagagtggaa
gtaagcaagctgcagcctaacatttcaaatggaagcctgaagattaatgatgcagagtgt
aaagaggtatctgaagatgatgatgagaagttagcaagattgttgcaacaagaagaggaa
tggaagatgatgaaacagagaggtaaacgtggaacaacttcccagaaaaatgtctacatc
aaaattagtgaagctgagattgccaatgactatcctctgcctgcatactataaaccctct
agtcaagaaatggatgagtacatatttgacagtgaagatagcttctattctgatgtgcca
gtaaggatcctcaacaactgggctttatacaatgcagactccaggcttattcctttggaa
ctaatccccatgaaagcaggcgctgaaaatgatatagttgtctttggatctggttttatg
agagaggatgatggaagttgctgttctactgctgaatctgcaaaattgtcttcatcaagt
agttctaaccaccaggatgcaggcgtttcaatttatctgagccctatcaaggagtgggtt
atagaatttggtggatcaatgatttgcataaccattcgaactgatgtggcctggtataag
ctacggcaacctacaaagcaatatgctccttggtgtgagcctgtcttgaaaacagccagg
ctctctgttagcatcataactctactaaaagagcaaagtcgtgcttcaaagctttccttt
gctgatgtcatcaagaaagtggctgaatttgataaagggagtcctgcatttgtatcatct
aatgttgcactggtcgagagatatattgtggtccatggacagattattcttcagcagttc
tcagattttccagatgagactatccggcggagtgcatttgctactggtcttttgatgaag
atggagcaaagaaggcatacaaagttggtcatgaagaaaaaggttcaagtgatgagagga
gagaatctgaacccaagtgcaactatggggccagcatcaagaagaaaagtgatgcgtgca
acaacaaccaggttgattaacaggatatggagtgattactatacacaccatttccctgaa
gattccaaggatgcagatgtgaatgaagctaaagaaattgatgatgaactggaagaaaat
gaagatgaggatgctgaagaggaagcacagattgaggaggaaaatgtctcaaaaactcca
ccatcaacacggtctcgaaagttggtatcacaaacatgcaaagaaattagatgggaaggt
gaagccattggtaaaacaccttctggagaagctctatacaaatgtgcttatgttcgagag
ctcagaataaatttgggacggacagttgcactagaagatgattcaggagaactggtcatg
tgctttgttgagtacatgtttcagaaacttaatggagcaaaaatggttcatggaaggcta
cttcagaaaggttcagagactgttcttggcaatgctgcaaatgaaagggatcttttctta
accaatgaatgtttagaatttgagttagaagatatcaaagaattgatgtctgtcaatctc
caatcattgccctggggtcacaagtatagaaaagagaatgctgaagctgacaggattgag
cgtgccaaagctgaagataggaagaagaaaggtttgccaatggaatatttatgcaaaagc
ttgtactggcctgagaagggtgcatttttctcccttcctcatgataagctgggccttggt
aatggtttctgtagctcttgtcagcagaaagagccagattgtgatgaattgcaaatacta
tccaagaacagcttcatttacagaaacattacctacaatgtcaatgactatttgtatatt
agacctgactttttctctcaagaggaggatcgtgcaaccttcaagggagggcgaaatgtg
ggtctaaagccctatgtagtttgccatctattggatgtccatgaacctgctggatccaga
aaaattcatccagcatcaacaaaaatcagtgttagaagattttacagaccagatgacatt
tcatcagccaaagcttatgtttctgacattagagaggtatactatagtgaaaatatagtt
aaagtgcctgtggatatgatagagggaaaatgtgaggtcaaaaagaagatcgacatctca
aactcagatgttccagtgatggttgaacatgaatttttctgtgaacatttctatgatcct
gccactggagcattaaagcagttgcctccaaatgttaagctcatgtctgtgcaacaaaag
gcaactggcgctttgaaaaagaacaaaggaaagcagatctgtgaaagtgatcaggtggat
tcagataaatgtacaaaggtgtccaaagagaaccgtcttgcaactcttgacatttttgct
ggctgtggaggtttatcagaaggactgcagcaagctggtgtatcgtttacaaagtgggcg
attgaatatgaggaaccagctggtgaagcatttaccaaaaatcatccagaagctgcggtg
tttgtggataactgcaatgtgattttgaaggcaattatggacaaatgtggagatgctgat
gattgcatttcaacttctgaggctgctgaacaagcagctaaattttctcaggacaatatt
atgaaccttcctgtccctggtgaagtagaattcataaatggtggtcctccatgtcagggc
ttttctgggatgaacagatttaaccaaagcccatggagtaaagttcaatgtgagatgatt
ttagcattcctgtcttttgctgaatatttccgccccagattctttcttttagaaaatgtt
aggaactttgtttcattcaacaaaggacagacatttcgactgacagttgcatcccttctg
gagatgggataccaggtccggtttggaattttagaggcagggacttttggtgttgctcag
tccaggaaaagagcattcatttgggctgctgcacctggagagactctgcctgattggcca
gaaccaatgcatgtgtttgctagccctgagctgaaaataaatttgcctgatggtaaatac
tatgcagctgcaaaaagcactgctggtggtgctcctttccgtgcaataacagttagagat
acaataggcgatttaccaaaggtggagaatggcgccagtaaactcctacttgagtacggt
ggcgaacccatctcctggttccagaagaagattagagggaacacgatcgcgctgaatgat
cacatatctaaggagatgaatgaactgaacctcatcagatgccaacgcattccaaagcgg
cctggttgtgattggcatgacctaccagatgagaaggtgaaactatcatctggccaactg
gtggacctgatcccttggtgcctgcctaacacagctaaaaggcacaaccagtggaaaggg
ctttatggtaggctggattgggagggcaatttccctacttctgtgacagacccccagcca
atgggcaaggttggcatgtgcttccaccctgaccaggataggatcatcacagtccgtgaa
tgtgcgcgatctcagggctttcctgacaactaccagttcgcgggcaacatccagagcaag
cacaggcagattggcaatgcggtgcctccacctcttgccttcgccctcgggaggaaactg
aaggaagctgttgatgcaaagcgtcagtag
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