KEGG   Octopus sinensis (East Asian common octopus): 115209631
Entry
115209631         CDS       T07665                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
osn  Octopus sinensis (East Asian common octopus)
Pathway
osn03020  RNA polymerase
osn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:osn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115209631
  09124 Replication and repair
   03420 Nucleotide excision repair
    115209631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osn03021]
    115209631
   03400 DNA repair and recombination proteins [BR:osn03400]
    115209631
Transcription machinery [BR:osn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     115209631
DNA repair and recombination proteins [BR:osn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115209631
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 CCDC93_CC
Other DBs
NCBI-GeneID: 115209631
NCBI-ProteinID: XP_029633943
UniProt: A0A6P7S754
LinkDB
Position
LG3:135138522..135145493
AA seq 146 aa
MAAASSTTTAATSNEQTEEDASELQFPKEFESAETLLISEVHMLLEHRKQQNESAEEEQE
LSEVFMKTHQYTQRFSKFKNRETISAVRSLLLQKNLHKFELAALANLCPDSAEEAKSLIP
SLEGRFEEEELQQTLDDIQTKRSFQY
NT seq 441 nt   +upstreamnt  +downstreamnt
atggctgccgcctcttcaaccactacggcagctacatctaacgaacaaacggaagaagat
gcttcggaattacagtttcccaaagaatttgagtctgctgagactttgttaatatcagaa
gtacatatgcttttagagcacaggaagcaacagaatgaaagtgctgaagaagaacaagaa
ttatctgaagtgttcatgaagactcatcagtatacacaacgttttagcaaatttaaaaac
cgagaaacaatctctgctgtgagaagtcttctactgcagaaaaatttacacaaatttgaa
ctggcagcattagccaatctctgcccagacagtgctgaagaagcaaaatccttgatacca
agtttggaaggaagatttgaagaagaggaattgcaacagactttagatgatattcaaacc
aagagaagtttccagtattga

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