Octopus sinensis (East Asian common octopus): 115215839
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Entry
115215839 CDS
T07665
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115215839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115215839
Enzymes [BR:
osn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115215839
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115215839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
115215839
NCBI-ProteinID:
XP_029641029
UniProt:
A0A6P7SS16
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All DBs
Position
LG9:93700361..93775380
Genome browser
AA seq
1131 aa
AA seq
DB search
MSGSMSEDKRDLYFKALNSPNYGSLHDKQHNLIQYLVRSHVDSFNFMLANTLQRSLESLP
EHAFRTEYGQIISFNIKDIFIGNPTVSKSNVSGATQMLYPAECRQRRISYTGPLIVTLGW
SIDGVKQEAIPKHLGDVPVMVKSNICNLKNLTPTELVQKGEEAEEAGGYFIINGIEKVVR
LIVEVRKNHPLCIKQPSLKKGGELFTEYALKIRCQKPNGFSRELTFHYLSNGCVQVSFQF
SKVYYIVPVMYLLKGLLDVSDNYIYDELLKGNEKNSFYKSCIIFMLRQLSNEDLLSQSSV
LKYLGSKFRAMYNNPWLSDEIMGERLLSDYICIHLQSNVDKFNLLVYLVKKLYAFVRGEC
AADNRDSIINHEVLDAGRLYSLVLFDNLYKWLRSIQYEINKLLSSKSYTTITPDILNEAI
RRRKTIVSYALNYLMATGNVSAQSSAPLWQKTGLCVIAERLNYHRFLSHFRAINRGSSLK
KHSIAGVRKLYPESWGFICPVHTPDGAPCGLLNHLTIGCQIVNTLYDLSSFPELLGSLGV
LSIGDKRDISYQEYYTVMLNGQILGYIHQDEAYVLCNKLRALKLDPSSKVPVTLEICFVP
KTENVSLYPGVYLFSGVSRLVRPVLNLTWNKLEMIGTFEQIYLDIAVNADSIHDGITTHM
ELKEQNILSLLANLIPFSDFNQSPRNIYQCQMGKQTVGMTPYALSFRADQKLYRLQTPQS
PIVRCEIYNDYQMDNYPLGTNVIVAVLSYTGYDMEDAMILNKGSVERGFSHGCIYKSINI
DLKSREMENSNFIFNNMDEIPGLDADGLPPVGTHLEYSSPYYSYFNQETSQQHTVYYHEK
EEAYVDQVKILGNDTGTGELTNVIIVLRVPRNPIIGDKFSSRHGQKGICSILWPSEDMPF
TESGMTPDILFNPHGFPSRMTIGMILEFMAGKSGALHGMSHDSTPFSFNDDYTASDHFGK
LLTAAGYNFYGTERLYSGVTGEELEADIFIGIVYYQKLRHMVSDKFQVRTTGRVDVQTHQ
PIKGRRRGGGARFGEMERDALIAHGSSFLLQDRLLNCTDRCLTKVCTECGNILSPIQSPV
DSTKIAYDMQHWSCMLCKKSETIKNITIPYVFRYLVAELAAVNINLKVDVK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaagcatgtcggaagacaagagagatctttattttaaagctttaaattctcca
aattatggcagtttgcacgataagcaacacaaccttattcagtatttggtacgttcacat
gtggattccttcaattttatgcttgctaacactcttcagagaagtttagagagtttgcct
gagcatgcattcaggactgaatatggacaaattatttctttcaacattaaggatatcttt
attggtaatcccacagtttctaaatcaaatgtgtctggagcaacacagatgctttatcca
gcagaatgtcgtcaaagaagaatctcttatacgggtccattaattgtcacacttggctgg
tccatcgatggagtcaaacaagaagctattcctaaacatttaggagacgttccagttatg
gtaaaatctaatatttgtaacttaaagaatttaacaccaactgaacttgttcagaaagga
gaagaagcagaggaagctggtggatatttcataattaatgggattgaaaaagttgtgcgt
ttaattgttgaagtacgaaaaaatcatcctttatgcataaaacaaccatcattgaagaaa
ggcggagagcttttcactgaatatgctttgaaaataagatgtcagaaaccaaatggcttt
tcaagggaattgacttttcactatctcagcaatggttgtgtccaagtttcattccaattt
tctaaagtttattacattgtgccagttatgtatttgctgaaaggtttgctggatgtcagt
gataattatatttatgatgaacttctcaaaggcaatgaaaaaaattctttttacaaaagc
tgtattatatttatgttacgtcaactttccaatgaagatcttcttagtcagtcaagtgta
ctcaagtatctgggtagtaaattccgtgctatgtacaacaatccctggctcagtgatgag
ataatgggtgaaaggttattgagcgattacatttgtatccacctccagtcaaatgtcgac
aagttcaaccttcttgtttacctggttaaaaaactgtatgcttttgtccgtggtgaatgt
gctgctgataacagagacagtataataaatcatgaagttttggatgctggtcgcctgtat
tccttggtactttttgacaatttgtacaaatggttgcgaagtatccaatatgaaatcaac
aagttgctctcttctaaaagttacacgacaataactcctgatattttgaatgaagccatt
aggaggagaaaaacaatagtaagctatgcattgaattatttaatggctactggtaacgtt
tctgctcaatccagtgcacctttatggcagaaaactggtctttgtgtcatagctgagcga
ttgaattaccacaggtttctgtcacattttagagctattaaccgtggttctagcttaaaa
aaacatagcattgctggtgtacgcaaactttatccagaatcttggggatttatttgccct
gttcacaccccagatggtgcaccctgtggtttactgaatcatttgaccattggatgccag
attgtaaatacgttgtatgatttgtcaagttttcctgaattgcttggttctttgggcgtg
ctgtccattggtgataaaagggacatctcctatcaggagtactacactgttatgctgaat
ggtcagatattaggatatattcatcaagacgaagcttacgttttgtgcaataaactccgt
gcattgaagctggatccttcaagcaaggttccagtgacattagaaatttgttttgttcca
aagacagaaaatgtcagcttgtatccgggcgtctatttattctcaggtgtttcacgttta
gtgcggccagtacttaatttaacttggaacaagttagaaatgattggaacttttgaacag
atttacctggatattgctgtgaatgctgatagcattcatgatgggatcacaactcacatg
gaattaaaagaacaaaatatcctcagccttttagccaatctgattccattctccgatttt
aatcaaagtcccagaaatatttatcagtgtcagatgggtaaacaaacagttgggatgaca
ccctatgcactctcttttagagcagaccaaaagctatatcgtttacagacaccacagagt
ccaatagtccgatgtgagatttacaatgattatcagatggacaattaccctttggggaca
aatgttatagttgctgtcctttcatacacgggttatgatatggaagatgccatgatttta
aataaaggttcagttgaacgaggattttctcatggttgtatttacaaatctataaatatt
gatttaaagagcagggaaatggaaaactcaaatttcatattcaataatatggatgagatt
ccaggtttggatgctgacggtcttccacctgtaggaacacatctggaatatagttctcct
tattacagttacttcaaccaggagacatcgcaacaacataccgtttattaccatgaaaag
gaagaggcatatgttgaccaagtaaaaattttgggcaatgacactggcacaggggaatta
accaatgttatcattgtattaagagtaccgagaaatccaattattggtgacaaattttca
agtcgtcatggacagaaaggcatctgtagtatactttggccttctgaggacatgcccttc
actgaaagtggaatgactccagatattcttttcaatcctcatggtttcccatctcggatg
acaataggtatgatcttagaatttatggcaggaaaatctggtgctctgcatggcatgagt
catgattctactccattctcattcaatgatgactatacggcatcagaccattttggaaaa
ctactcactgcagctggttacaacttctatggaactgaacgactctacagtggggtcact
ggtgaggagctagaggctgatatcttcataggtattgtctactaccagaaattgagacat
atggtttcagacaagttccaggtgagaacaactggtcgtgtggatgtacagacacatcag
cctataaaaggtagaagacgcggtggtggtgctcggttcggagaaatggaaagagatgcc
ctcattgcacacggttcctcgtttcttttgcaagaccgtctactcaactgcactgaccga
tgcctgacaaaagtttgcactgaatgtggaaatatactttctcctattcagtctccggtt
gatagcacaaaaatagcttatgatatgcaacattggtcatgtatgttatgtaagaagtca
gagactattaaaaatatcaccattccgtatgtgttccgttaccttgttgcagaacttgct
gctgtaaacatcaacctaaaagttgatgttaaatga
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