KEGG   Ostreococcus tauri: OT_ostta02g00300
Entry
OT_ostta02g00300  CDS       T01358                                 
Name
(RefSeq) DNA-directed RNA polymerase, subunit K/Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ota  Ostreococcus tauri
Pathway
ota03020  RNA polymerase
ota03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OT_ostta02g00300
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta02g00300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta02g00300
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta02g00300
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     OT_ostta02g00300
  RNA polymerase III system
   RNA polymerase III
     OT_ostta02g00300
  RNA polymerase I system
   RNA polymerase I
     OT_ostta02g00300
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      OT_ostta02g00300
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 9832651
NCBI-ProteinID: XP_003074762
UniProt: Q01F81
LinkDB
Position
2:80411..80860
AA seq 149 aa
MEDEREDYGDDVDDVVDALEAAEDEDERDLEGGDADGRVIVESDERGDALGTHGRRGTGG
AVPRHLRTTTPYMTKYERARVLGTRALQISMNAPVLVQLEGETDPLEIAGKELREKRVPF
VVRRYLPDGSYEDWCIEELIVHDPDARRT
NT seq 450 nt   +upstreamnt  +downstreamnt
atggaggacgagcgcgaggattacggtgacgacgtcgacgacgtcgtcgacgcgctcgag
gcggcggaggacgaggatgaacgagacctcgaggggggggacgcggacggacgggtgatc
gtcgagagcgacgagcgaggcgacgcgctcggtacgcacggtcgaagaggaaccggtggg
gcggtaccgagacacttgcgaacgacgacgccgtacatgacgaagtacgaacgggcgagg
gttctgggaacgcgcgcgttgcagatctcgatgaatgcgccggtgctcgtgcagctcgag
ggcgagacggatccgttggagatcgcggggaaggagctccgggagaagagagtgccgttc
gtcgttcgaagatatctcccggatggctcgtacgaggattggtgcatcgaggagctgatc
gtgcacgatccggacgcgcgaaggacgtga

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