KEGG   Ostreococcus tauri: OT_ostta02g01770
Entry
OT_ostta02g01770  CDS       T01358                                 
Name
(RefSeq) DNA-directed RNA polymerase, subunit C11/M/9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ota  Ostreococcus tauri
Pathway
ota03020  RNA polymerase
ota03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OT_ostta02g01770
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta02g01770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta02g01770
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta02g01770
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     OT_ostta02g01770
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      OT_ostta02g01770
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C DUF6010 DUF5816 Ta0938 DUF6510
Other DBs
NCBI-GeneID: 34945594
NCBI-ProteinID: XP_022840730
LinkDB
Position
2:380362..380742
AA seq 126 aa
MENAEGAPQTGTVPLRFCPNSNDLLYPKEDRQNKRLVYFCRNCDFTAAASDSCVHRRTIS
HSASEITAVLHDVRTDPTLPHSKDVQCALCDTKEAVFFSQTTTEGMSLFFQCISCGHKWK
DTGSVA
NT seq 381 nt   +upstreamnt  +downstreamnt
atggagaatgccgagggtgctcctcaaactggcacagtgccactgagattttgtccaaat
agtaacgatctgctttacccgaaagaagatcggcaaaacaagagattggtatacttttgt
cgtaactgcgacttcacggccgctgcgagtgatagctgcgtgcatagacgaactatctcc
cactcagcctccgagattaccgcagtgttgcacgacgtaaggacagatccaaccctgcca
cactcgaaggacgtccagtgcgcactgtgtgatacaaaggaggcggtatttttctcacag
accactacagaaggaatgtctttgttttttcaatgtatatcgtgtggacataaatggaaa
gacacgggctcagttgcgtga

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