Ostreococcus tauri: OT_ostta02g03430
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Entry
OT_ostta02g03430 CDS
T01358
Name
(RefSeq) DNA-directed DNA polymerase, family B, pol2
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ota
Ostreococcus tauri
Pathway
ota03030
DNA replication
ota03410
Base excision repair
ota03420
Nucleotide excision repair
ota03430
Mismatch repair
ota03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OT_ostta02g03430
03410 Base excision repair
OT_ostta02g03430
03420 Nucleotide excision repair
OT_ostta02g03430
03430 Mismatch repair
OT_ostta02g03430
03440 Homologous recombination
OT_ostta02g03430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ota03032
]
OT_ostta02g03430
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta02g03430
Enzymes [BR:
ota01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OT_ostta02g03430
DNA replication proteins [BR:
ota03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
OT_ostta02g03430
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
OT_ostta02g03430
MMR (mismatch excision repair)
DNA polymerase delta complex
OT_ostta02g03430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
zf_Rg
Motif
Other DBs
NCBI-GeneID:
9836742
NCBI-ProteinID:
XP_003075187
LinkDB
All DBs
Position
2:complement(668762..672289)
Genome browser
AA seq
1175 aa
AA seq
DB search
MDDSTNTCRRSRRCDDGRRRGANTTRGVGGGVGDGTPRGLGAFGRFENASADARASSAVR
AMLGEGASTVGRSTKKRARDGEDAAPDLDVDALIADAERDGLEDARVKNQEEYDDDADFD
EEEVYARTGQEGGTSVVVDAADRANWVRKPLKKPLCDRSDALLFQQLDIDYVVDKPHETL
GSRRGKGDAAVVRMFGVTNDGHSVCAHVHGFEPYFYASVPENFGEADCETFRRRLNEEVS
SARKNAPGVFVIAVTLERKQSLMHYSEMKDRLFAKITMGLPNMVSAARGILEKGFSVPGI
RDGSFTTYPTFESNIVYALRFMVDCGVVGGNWIELPAGDYKVRSKKVSHCQIEVDVSYDK
IISHPAEGEYSKLAPFRILSVDIECAGRKGHFPDAKQDPVIQIATLVTEQGSDKPIIRAV
WTLDTCAPIVGADVLSFKDERELLRNWGSFLRGCDPDLLIGYNIVNFDFPYLLDRAETLG
VADFPYWGRMIGTKVRMRDTVFSSKAYGTHESKEISCEGRVQFDMLRAIQRDYKLSSYSL
NAVSAHFLGEQKEDVHYSAISELQNGTPETRRRLAVYCLKDAYLPQRLLDKLMYMYNYIE
MARVTGVPLNYLLTRGQSIKVMSQLLRKARQRNMLIPHMAKREGGNVQAEGGVAYEGATV
LEAKSGYYEVPVATLDFASLYPSIMMAHNLCYSTLVPKHMVSKLNPEDVGTSPAGDTFVK
ANKVKGILPEILEELLGARKRAKADLKKATDPFVKAVLDGRQLALKISANSVYGFTGATV
GQLPCLEISSSTTAYGRTMIDHTKKMVEERYTTMNGYAGNAEVIYGDTDSVMIKFNTPDL
AEAMRLGEEAAVYVSDTFLKPIKLEFEKVYWPYLLISKKRYAGLLWTNTEKYDKMDTKGI
ETVRRDNCLLVRQVVETVLEKILKERDVQGAVKYVQNTIADLLMNKLDFSQLVITKGFTK
EADSYGVKMAHIELAQRMRQRDPATAPVVGDRIAYVIIKAAKNAKAYEKSEDPIYALDNN
LPIDTNHYLDHYLTKPLLRIFEPILHNAQSVLFHGEHTRRIAQPTPTAKAGGIMQFAKIR
LSCIGCRAPISDEKLSKSLCKNCLKEEAMHLQRALASVNGLEEDFNRLWTQCQRCQGSLH
QDVLCTSRDCPIFYRRKKVQKDLTEAAAQLKRFDW
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagtacaaacacatgccgtcggtcgcgtcggtgtgatgatggacgtcggcgt
ggtgcgaatacgacgcgcggcgtcggcggtggcgtcggcgacggcacgccccgggggctc
ggcgctttcgggcgatttgaaaacgcatccgcggacgcgcgcgcgtcgagcgccgtgcgc
gcgatgctcggcgagggtgcgtccacggtggggcgttcgacgaaaaaacgcgcgcgcgat
ggcgaggacgcggcgcccgatctggacgtcgacgcgctgatcgccgacgccgagcgggat
gggttggaggatgcgcgtgtgaaaaaccaagaggagtacgacgacgacgcggatttcgac
gaggaggaggtgtacgcgcgcactggacaggagggagggacgtctgtcgtcgtagacgcc
gccgatcgagcgaattgggtgcggaaaccgctgaagaaacctctgtgtgatcgttcggac
gcgctgttgtttcaacagttggacatcgactacgtcgtcgataagccgcacgaaacctta
gggagtcgtcgagggaaaggtgacgccgcggtggtgcgaatgttcggcgtaacgaacgac
ggtcacagcgtgtgcgcgcacgtgcacggtttcgagccatatttttacgcgtcggtgccg
gaaaattttggcgaggcggattgcgagacgtttcgaaggagactgaacgaggaggtcagc
tcggcgaggaagaacgcgcctggggtgttcgtgatcgcggtgacgttggagaggaagcag
agtttgatgcattacagcgagatgaaagatcgtttgttcgcgaagatcacgatggggttg
ccgaacatggtgagcgccgcgcgtggcatcttggagaaggggttcagcgtgcccgggatc
agagacggatcgttcacgacgtacccgacgttcgagtccaacatcgtctacgcgctgcga
ttcatggtggattgtggcgtggtcggtggtaactggatcgagcttccggcgggggattac
aaggtgaggtcgaagaaggtgtcgcactgtcaaatcgaggtggacgtgtcgtacgataaa
atcatctcgcacccagcggagggtgaatactcgaagctcgcgccgtttcgcatcttgtcg
gtggacatcgaatgcgccgggcgaaagggacactttcctgacgccaagcaagaccccgtg
atccagatcgcgacattggtgacggagcaagggagcgacaaaccgatcattcgcgccgtg
tggacacttgacacgtgcgcgccgatcgtcggcgccgacgtcttgagcttcaaggatgaa
cgagagttactgaggaactggggcagttttcttcgagggtgtgatccggacttgttgatt
ggatacaatatcgtgaattttgatttcccgtacttgttagatcgcgctgagacgctcggc
gttgctgactttccgtattggggacgcatgatcggcaccaaggttcgcatgcgcgacacg
gttttctcgtccaaggcgtacggtacgcacgagagtaaggagatttcgtgcgagggtcgg
gtgcagttcgatatgctgcgcgcgattcaacgcgattataaactgtcgtcgtactcactc
aacgccgtgtcggctcactttttaggagaacagaaggaagacgtacactacagtgccatt
tccgagctgcaaaacggtacgccggaaactaggcgacgtcttgcagtgtactgtttgaag
gacgcctacctgccgcagcgtttgctagacaaactgatgtacatgtacaactacatcgag
atggcgcgcgtcaccggcgtgccgctgaactacttgctcactcgcggtcagtccatcaag
gtcatgtcgcaattactgcgaaaggcgagacagagaaacatgttgatcccacacatggcg
aagagagagggcggaaacgtgcaagctgagggtggtgtcgcctacgaaggagccactgtg
ttggaggcgaagtctggttactacgaggtgcccgtcgcgacgctagatttcgcctcgctg
tatccgtccatcatgatggctcacaacttgtgctactcaaccctagtaccgaaacatatg
gtaagtaagctaaacccggaggatgtgggaacgtctcccgccggtgatactttcgtcaag
gcgaacaaggtgaaggggattttgccagaaattttagaggaactgctcggcgcacgtaag
cgcgccaaggctgatttgaagaaggcgaccgatccgttcgtgaaggctgtgttggacggt
cgtcagctcgcactcaagatctctgccaactccgtatacggtttcaccggtgccaccgtg
ggtcaacttccgtgtctcgaaatttcctcatcaacgacggcatacggtcgtacgatgatt
gaccacacaaagaaaatggttgaggaacgatacacgacgatgaacggctacgccggcaac
gccgaggtaatttacggtgacactgactctgtgatgatcaagttcaacactccggacttg
gcggaggcgatgagactcggcgaggaggctgctgtgtacgtatcagatacgtttttaaaa
ccgattaagctcgagttcgaaaaggtgtactggccgtacctcttgattagcaagaagcgt
tacgccggtcttctctggacgaacactgagaagtacgataaaatggacaccaagggtatc
gagactgtgcgtcgcgacaactgtctactcgtgcgccaggtcgtcgaaactgttttggaa
aagattttgaaagagcgtgatgtgcagggcgccgtgaagtacgtccaaaacaccatcgca
gacttgttgatgaacaagctggatttctcgcagctcgttatcacgaagggtttcaccaag
gaggcagactcgtacggggtcaagatggcgcatatagagctcgcgcagcgcatgcgtcag
cgagatcccgccaccgcgccggtggtcggcgaccgcatcgcctacgtcatcatcaaggcg
gcaaagaacgccaaggcgtacgaaaagtctgaggacccgatctacgccctagacaacaac
ctgccgatcgatacgaaccattacttggatcattacctcaccaagccgctactgcgcatc
ttcgaaccaatcttgcacaacgcacagtccgtgctgttccacggcgagcacacccgccgc
atcgcgcaaccgacgccgacggccaaggcgggcgggatcatgcagttcgctaaaatccgt
ctcagctgcatcggctgtcgcgccccgatctcagacgagaagctctcgaaatcgctgtgc
aaaaactgcctgaaagaggaggcgatgcacctgcaaagagcgctcgcctcggtgaacggt
ctggaggaggacttcaaccgtctctggacgcagtgccagcggtgccaaggctcgctccat
caagacgtcctgtgcacctcgagagattgcccgatcttttaccgacgtaaaaaagtccaa
aaagaccttaccgaagccgcggcgcagttaaagcgctttgattggtga
DBGET
integrated database retrieval system
