Ostreococcus tauri: OT_ostta14g00940
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Entry
OT_ostta14g00940 CDS
T01358
Name
(RefSeq) DNA-directed RNA pol I, largest subunit
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ota
Ostreococcus tauri
Pathway
ota03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OT_ostta14g00940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta14g00940
Enzymes [BR:
ota01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OT_ostta14g00940
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
OT_ostta14g00940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
9837761
NCBI-ProteinID:
XP_003082901
LinkDB
All DBs
Position
14:complement(158546..163762)
Genome browser
AA seq
1738 aa
AA seq
DB search
MSTSREPRVARHRVQQRGLVQREIASASFSFYDADEVRKISVKRITNPTLFDGLNNAVPD
GLYDPALGPTDAKTTCVTCKYPGGMCDGHFGHIELVVPVYNPLTFGTVVRLLKTTCFHCH
RFRMHESRVRRFRERLEMLMDGDVEGAENVMPEISKKAKKEMSEIWQEVEDDGDVEEMDL
DNIHDVLPRLKTKGKNGPVAWTSVSSTAARELIKEFLSIQPKKCENCNAVNPKVSTEGHN
KIFRGQIAKQAHLNNLANGININEDMQRLARQASAESADSHEGASKLAGAEVEPRLIPAK
KKVRKRLGEGDESDESTDDEDGSRDKTKTGGAEGENSESTSDDSDNSDADEMSVDERVPE
QTKPLYITPIEARALLKRLWGNEYDFCSLIWATNGPSKKSKGLSERRSDPSRFFVQTLLV
TPSKFRPASKMGDMIFEHPQNTSLTTIIQANLSLAELFRTPPTVPEPPEVRAGRAVRAWL
ALQSGINRLIDATKADTQEAKQAIGIRQQLEKKEGLFRMNMMGKRVNFAARSVISPDPYL
GTSEIGVPPVFAKKLTFPELVTPHNVDLMRTLVENGPDIHPGANAIEDERGRVIHLDKFT
AEKRAAIAKTLLATTASGSADGPARPLAKTVYRHLRNGDVMLVNRQPTLHKPGILAHTAR
VLPGQRVVRMHYSNCSTFNADFDGDEINLHFPQDHLGRAEAYEIMHGDRQFTVPTDGKPL
RGLIQDHICSGLILSMRDRFLNRSEFTQLLYSALVDYCGETHGTIEVPPPALLKPQRLWT
GKQLIGAAITHITRGRPPMTFSAPCKIPGTFFGGEDSGEDRLVIRRNYFCTGVVDKNMFG
KYGLVHAVAELHGRSVAGALLSIFTRLFTTFLQKHGFTCGIDDLILTEQAEQDRLDELEK
ADEACKTATADVAEATGKSDEQVMRAVAAKLRENAAWGAQLDMKASGALNKVTSATVKKC
LPLGTKKMFSKNCLSLMTISGAKGSLVNFSQIAAALGQQELEGRRVPRMPSGKTLPCFEA
YDVSARANGYIACRFFSGLDPPEYFFHCMAGREGLVDTAVKTARSGYLQRCLVKNLESLR
VHYDYTVRDCDGSIVQFQYGEDSVDVTRSGYLQKFEFLAENPELIMLNNKSAISTLPTLN
KKNVKVIDEISRKEDIPRFATENFGNQLGVLPEKFSVELKTFIDSRPKGYWADEKGDIKN
ASLAAKSGVTAEEFATLMNMMFLSNVAPPGEAVGVVAAQSVGEPSTQMTLNTFHFAGRGE
ANVTLGIPRLRELLMAASRKLLTPVMVLPLRKGYRSKEHANTLCRRLRRVVLAELMEKLS
VKIKDYGTGPDGRLSRLYTVSIHMREGHDENDPNEVTFKEFARTVKLKFAPQLVGRIGSE
MKKNKAKGIIIKNATGPMEGTTAPREALDGDDDSKLDEGVGKKKVKFEANGDVSDEDDDE
EDEEGAKMEKRKADEDGNDASDSDDSSDEDSESDDDDDSEVSSDDGEAVDTKTSKTKRVA
GDFTDAGVQLPSSEVVESIVLNEKARTLEFTIPCGINSPHVLALEVAQDLAVKIVIRETP
GIKQTFVVGKPEAEDPNGMQPLSVQTDGISFRAAWANSDLIDVDMIKSNSVWDIMQTFGV
EAGRATLVSEVQAVFSVYGIGVDARHLSLIGDFMTQQGEYRPCNRSGIEKSISPFLKMSY
ETATAFLTEATIRGETDDLSSPSSRIVVGRTVNLGTGSFSLKHDVPRAAKYLEANKKR
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtccagggaaccgcgcgtggcgcgacatcgcgtgcaacagagagggctcgtg
cagagggagatcgcgagcgcgtcgttctcgttctacgacgcggacgaggtgaggaagatc
agcgtgaagaggatcacgaacccgacgctattcgacgggttgaacaacgccgtgccggat
ggattgtacgatccagcgctggggccgacggatgcgaagacgacgtgcgtgacgtgtaag
tacccgggagggatgtgcgacggacacttcgggcacatcgagttggtggtaccggtgtat
aaccctttgacgtttgggaccgtggtgcggttgctcaagacgacgtgttttcattgtcat
cgtttcaggatgcacgagagtcgggtgcggaggtttcgggagcggttggagatgctcatg
gacggtgatgtcgagggggcagagaacgtgatgccagagattagtaagaaggcgaagaag
gagatgagcgagatctggcaagaggttgaggacgacggcgacgtcgaggagatggatttg
gacaacattcacgacgtcctgccgaggctcaagacgaagggaaagaacggtccggtagcg
tggacgtccgtatcgtctaccgccgcgcgggagctcatcaaggagtttttgtcaattcag
ccaaagaagtgcgaaaactgcaacgccgtgaacccgaaggtgtcgacggagggacacaat
aagattttccggggtcagatcgcgaaacaagcgcatctgaacaacctagcgaatgggatc
aatataaatgaggacatgcagagattggcgcgtcaagcaagtgcggagagcgcagattcg
cacgagggagcgtccaagctggcaggagcggaggtcgaacccaggttgattccggcaaag
aaaaaagtgagaaagaggctcggtgaaggcgacgagtccgatgagtcgaccgacgacgag
gatggatctcgggataagacgaaaacaggcggtgcagagggtgaaaactcggagagcacg
tcagatgatagcgataacagcgatgccgacgagatgtccgtggacgagcgcgtgccggag
cagactaaaccgttgtacatcactcccatcgaggctcgagcgctgctcaagcgcctttgg
gggaatgagtacgacttttgctctttgatctgggccacgaacgggccctcgaagaagtcc
aaagggcttagtgagcgtcgaagtgacccgtccagattttttgttcagactctgttagtg
acaccgtccaagttccgaccggcgagtaaaatgggagacatgatttttgagcatccgcaa
aacacatcgctcacgaccatcatacaggccaacttgagcctcgctgagttgtttaggaca
cctccgacagtgccagagccgccggaagtgcgcgctggaagagccgttcgcgcttggctg
gcacttcagtcgggtataaacagactcattgatgcaacgaaagccgacacgcaggaggcc
aagcaagcgatcgggatccggcaacagctagaaaagaaagaaggtcttttccgtatgaac
atgatgggaaagcgcgtcaacttcgccgcgcgctcggtgatttctcctgacccttacttg
ggaacaagcgaaatcggcgttccacccgtcttcgccaagaaactaacgtttcccgagctc
gttacgcctcacaacgttgacttgatgcgaaccctagtggaaaacggtccggacattcac
ccgggcgcgaacgcgatagaagatgagcgaggtcgagtaattcaccttgataagtttacc
gccgaaaagagagcggccatcgcgaagaccctcttggcgacgaccgccagtggatctgcc
gacgggccagctcgtcctctcgcaaagacggtctacaggcacttgcggaatggcgacgtc
atgctcgtcaatcgtcagccaacgctacacaagccgggtattttagcgcacacggcgcgt
gtgcttcccgggcaacgcgtcgtccgtatgcactactcaaactgctccacattcaacgct
gattttgacggggatgagatcaaccttcactttccacaagatcatcttgggcgcgccgag
gcgtacgagatcatgcacggcgatcgtcagttcacggtaccgacggatggcaagccgctt
cgaggtttgattcaggatcacatttgctccggtctcattctctccatgcgagacagattt
ttaaaccgatcagaattcacgcaactattgtacagtgcgcttgttgattactgtggtgag
actcacggaacgatagaagttccaccgccagcgttgctcaagcctcagagactgtggacg
ggcaagcagctgataggtgccgcaatcacgcatatcactcgcggtcgaccgccgatgacg
ttcagcgcgccttgcaaaatccccggcacgttcttcggcggtgaagactctggagaagac
cgcctcgttattcggcgcaattatttctgcaccggtgttgttgataagaacatgttcggt
aagtacggccttgtacacgccgtcgctgagcttcacgggcgctccgtcgctggcgctctg
ttgtccatcttcacgagacttttcacaacgttcttgcaaaagcacggatttacatgcggc
atagatgacttgattctcactgagcaagccgaacaggatcgtctagatgagctcgaaaag
gctgacgaggcgtgtaagactgccactgcggacgttgcagaggcgaccgggaaatcagac
gagcaagtgatgcgtgcagtcgcggcaaaactgagggagaacgccgcttggggcgctcag
ttggacatgaaagcttctggtgcgctgaacaaagtgacatcggcgacggtgaaaaagtgt
ctgccgttagggactaaaaaaatgttctcgaagaactgtctgtccctcatgacgatttct
ggtgcgaagggctctttggtgaacttttcgcagatcgccgctgcgttgggccagcaagag
ctcgaagggcgtcgcgttcctcgaatgccgagcgggaaaacgcttccgtgcttcgaagcc
tacgatgtcagtgcgcgagctaacggctacattgcgtgccgtttcttcagcggtctggac
ccgccagagtactttttccactgcatggctgggcgtgaaggtctcgtcgacaccgctgtg
aaaaccgcgcgctccggttacctgcagcgctgcttagtgaagaaccttgaatcactgcga
gtgcactacgattacaccgtccgcgattgcgatgggagtatcgtgcagttccaatatggt
gaagactccgtcgacgtcactcgttctggatatttgcaaaaattcgagttcctcgccgaa
aacccggagcttatcatgctcaacaacaagtcagccatctcgacgttgccaacactcaac
aagaagaacgtcaaggttattgacgaaatcagccgcaaggaagatatacctagattcgcg
actgaaaactttggcaaccaactgggtgtcttgcccgagaagttcagcgtcgaactcaaa
acattcatcgattcacgcccgaaaggatactgggccgacgaaaagggtgatataaagaat
gcttctctcgctgccaagtctggcgtcacggctgaagagtttgcgactctgatgaacatg
atgttcctcagcaacgttgcgccgcccggtgaagccgtcggcgttgtagcggctcagtct
gtcggagaaccttcaacgcagatgactttgaacacgttccacttcgctggtcggggcgaa
gcaaacgtcacgctcggtatcccgcgtctgcgcgagcttctcatggcggcatcgaggaag
ttgctcacgcctgtcatggtgcttcctttgaggaaaggatacagaagcaaggaacacgcg
aacactctctgtcgacgccttcgcagagtagtgttggcggaactcatggagaagctctca
gtaaagataaaagattacggcacgggaccggacggacgcctgtcgcgactctacacggtg
tccattcacatgcgcgagggacatgacgagaacgaccctaatgaagtgacattcaaggag
tttgctcgcacggtcaagctcaagtttgcgccgcagctcgtgggcagaattggaagcgag
atgaaaaagaacaaggcgaagggcatcatcatcaagaacgccacgggtccgatggaaggg
acgaccgctccgcgagaagctctagatggtgacgatgactcaaagcttgatgaaggggtc
ggcaagaagaaggtcaagtttgaagcgaacggcgacgtctcggatgaggatgatgacgaa
gaggatgaggaaggagcgaaaatggagaagagaaaggcggacgaggatggaaacgatgcc
agtgactcagatgattcctctgatgaagactctgagtctgatgacgacgacgattccgaa
gtatcatctgacgacggtgaggccgtcgatacgaaaacgtcgaagacgaaacgtgtcgcc
ggagactttaccgacgccggtgtgcagctaccgagtagcgaagtcgttgaatccatcgtc
ctgaacgaaaaggcacggaccttggagttcaccatcccctgcggcatcaattcgccgcac
gtcctcgcattggaggttgcgcaggatcttgcggtgaaaatcgtcattcgagagactccc
ggaattaagcaaacattcgtggtgggtaaacctgaagccgaggatccaaacgggatgcag
ccgctctcggttcagacagatggtatttccttccgagccgcatgggccaactctgacttg
attgacgtcgacatgataaaatccaactctgtatgggacatcatgcaaacgttcggcgtc
gaggcgggacgagcgacacttgtgagcgaagtccaggccgtgttctccgtgtatggtatc
ggtgtcgacgctcgtcacctctcactcatcggcgatttcatgacgcagcaaggcgaatac
aggccgtgtaacagaagtggcatcgagaagagcatttcgccgttcttgaagatgtcttac
gaaacggcgaccgctttcctgacggaggccactataagaggcgaaacagatgacctcagc
tcgccttcgtctcgcatcgtcgttgggcgcaccgtcaatctgggtaccgggtcgttctct
ctcaagcacgacgtgcctcgcgccgcaaagtatttggaggcaaacaagaaacgttag
DBGET
integrated database retrieval system
