Onychostruthus taczanowskii (white-rumped snowfinch): 121333012
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Entry
121333012 CDS
T07590
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otc04040
]
121333012 (SCN4A)
Ion channels [BR:
otc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121333012 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
121333012
NCBI-ProteinID:
XP_041254956
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQQVEMPEEEEVKPSSDLEAGKN
LPLIYGDPPVELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPPNSTFLQDLGLDNDTSAN
STFYDFMDDFTGNFTGNFTGNFTGNDTFDFEAYISDEANYYFLEGALDALLCGNSSDAGK
CPKGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFV
VVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQE
RSSSSDSLPSSVAGKGHDSDVNSDQDKAKDCNGQVVPKITLQRSDTVVDFNPHEPEKPDL
NHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCRPWVK
LKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFTAEMV
LKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMND
FFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFS
ADSLAASDDDGELNNLQIAIGRITRGIALAKATLLALLRRLWKGKKVAPEEEQDPSKRDN
SVLNHVDTALEPKSGYLDGITGKEHIFMDELDHMNFINNPNLTVQVPIASEESDLYEETS
TQSDTEDTTKNPLCSDNASSVCSTVDYKPPAPEEEEVAEEAEEGNEPEECFTEGCVKKFP
CLYVDITSEKGKTWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRT
ILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSELG
AIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA
GKYYRCVNTTTGELFDIDVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATF
KGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKK
KFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGKVFDFVTKQVFDITIMILI
CLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFVV
VILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALF
NIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSMICLFQITTSAGWDGLLN
PILNSGPPDCDPELENPGSSVKGDCGNPAIGIFFFCSYIIISFLIVVNMYIAIILENFSV
ATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLIT
MDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLK
RKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQDELGEDAPEKEGLIATKMQEIYGNT
GTDVDTAPALGLEPIPSSEMPQDAPEEAQAWVKEHVVKESLV
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgagaacctgcgccccttcaccccggcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcgctccggataaagcggcagcag
gtggagatgcctgaggaagaggaggtcaagcccagcagtgacctggaagccggcaagaac
ttgcccctcatctatggtgacccacccgtggagctgatcgggacccccctggaggacctg
gaccctttctacaaggacaagaagacgttcatagtccttaacaagggcaagtccatcttc
cgcttctcggccacccctgccctctacatgctggggcccttcaaccccatccgcagagga
gccatcaaagtcctcatccattcattattcagcatgttcatcatgatcaccattttaact
aactgcgtctttatgacgctgagcaaccccccggcatggtccaagaacgtggaatacgcc
ttcactgggatctacacctttgagtctctcatcaagatcctctcaagaggcttctgcatc
gatgacttcacattcctgcgtgacccgtggaattggctggacttcatggtcatctccatg
gcctacattaccgagttcgtggacctggggaacatctccgctctcaggaccttccgtgtc
ctccgtgccttgaaaacgatcacggtgataccagggctgaagacgattgtgggggctctg
atccagtcggtgaagaagctctcggacgtgatgatcctcacggttttctgcctgagcgtc
ttcgccctcatcggcctccagctcttcatgggcaacctccggcagaagtgtgtgcgctgg
cctccccccaacagcaccttcctgcaggatctggggctggacaatgacacttcggccaac
tccaccttctacgacttcatggatgacttcaccgggaacttcacggggaacttcacgggg
aacttcaccgggaacgacacctttgacttcgaggcctacatcagcgatgaagccaattac
tacttcctggagggagccctggatgccctgctctgcgggaacagcagcgacgctgggaag
tgccccaagggctacgagtgcatgaaggctggcaggaaccccaactatggctacaccagc
tacgacaccttcagctgggccttcctggccctcttccgcctcatgacgcaggacttctgg
gagaacctcttccagctgacactgcgggcagcagggaaaacctacatgatcttcttcgtg
gtggtcatcttcctgggctccttctacctcatcaacctcatcctggccgtggtggccatg
gcctatgctgagcagaacgacgccaccatgctggaggagcagcagaaggaggaggaattc
caacagctcatggagcagctgaagaagcagcaagaggagcaggaaaggctgttgcaggag
cgctcgtccagcagcgattccctgcccagcagcgtggccgggaaggggcacgactccgac
gtgaacagcgaccaggacaaggccaaggactgcaatgggcaggtggtgcccaagatcacc
ctgcagagatccgacaccgtggttgatttcaacccccatgagccggagaagccagacctc
aaccacctcactgtgggcaaccaggatgggccagggctggagaagagggtgggaagtgcc
atcagtgtcatctccaatgctgtggaagagctggaagaagctcaccagaaatgtccaccc
tggtggtacaaattcgcccacacattcctggtctggaattgctgccgcccgtgggtgaag
ctgaaggagtttgtcaagctggtggtgatggaccccttcgtggacctcggcatcaccatc
tgcatcgtgctcaacactctcttcatggccatggagcactaccccatgacggaggagttt
gagaacgtgctgagcgtggggaacctggtcttcacagggatcttcacggcagagatggtc
ctgaagctcattgctctggatccctacgagtatttccagcagggctggaacatctttgac
agcttcatcgtcactctgagcctggtggagctgggcctagccaacgtgcaggggctctcc
gtgctccgctccttccgcctgctgagggttttcaagctggccaagtcctggcccactctc
aacatgctcatcaagatcatcggcaactccgtgggtgccctgggcaacctcacgctggtt
ctggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttggcaagagctac
atcgagtgcgtgtgcaagatctctgtggactgcaccctgccccgctggcacatgaacgac
ttcttccactccttcctcattgttttccgcatcctctgcggggagtggatcgagaccatg
tgggactgcatggaggtggcgggccagaccatgtgcctcatcgtcttcatgatggtcatg
gtcatcggcaacctcgtggtgctgaacctgttcctggctctgctgctgagctccttcagc
gccgacagcctggcggcgtcggacgatgacggggagctgaacaacctgcagatcgccatc
ggccgcatcacgcgcggcattgccctcgccaaggccacgctgctggcgctgctgcgccgc
ctctggaagggcaagaaggtggcaccggaggaagagcaggaccccagcaagagggacaac
tccgtgctcaaccacgtggacacggccctggagcccaagtcagggtacctggatggcatc
acgggcaaggagcacatcttcatggatgagctggaccacatgaacttcatcaacaacccc
aacctgacggtgcaggtccccatcgcctctgaggagtccgacctctacgaggagaccagc
acccagtctgacaccgaggacaccaccaagaaccccctgtgcagcgacaacgcctcgtcc
gtgtgcagcacggtggattacaaaccccccgcgcccgaggaggaggaggtggcagaggag
gctgaggagggcaacgagcccgaggagtgtttcactgaaggctgtgtgaagaagttcccc
tgcctctacgtggacatcaccagtgagaaggggaagacttggtggaacctcaggaaaacc
tgcttccgcatcgtggagcacgactggttcgagaccttcatcgtcttcatgatcctcctc
agcagtggggctctggctttcgaggacatctacatcgagcagcgcaaggtgatccgcacc
atcctggaatacgcagacaaggtcttctcctacatcttcgtcatcgagatgctgctcaag
tgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctggatttcctc
atcgtggatgtgtccctggtcagcctgacagcaaactggctgggatactctgagctggga
gccatcaaatccctgcggacactgagggctctgcgacccctgcgtgctctgtcccgcttt
gagggcatgagggtggtggtgaacgccctggtgggtgcaatcccctccatcatgaacgtc
ctgcttgtctgcctcatcttctggctgatcttcagcatcatgggggtgaacctgttcgca
ggcaagtactacaggtgtgtcaacaccaccaccggggagctcttcgacatcgacgtggtc
aacaacaagagcgactgcatggccctgctccacaccaacgaggtcagatgggtcaacgtc
aaggtcaacttcgacaacgtgggcttgggatacctgtccctgctgcaggtggcaaccttc
aaaggctggatggacatcatgtatgcagccgtggactcacgtgagattgaagagcagcca
cagtacgagatcaacctctacatgtacatctacttcgtcatcttcatcatcttcggtgcc
ttcttcaccctgaacctcttcatcggcgtcatcatcgacaacttcaaccagcagaagaaa
aagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactacaacgccatg
aagaagctgggctccaagaaaccccagaagcccatccccaggccagcgaacaaattccaa
gggaaggtgtttgactttgttaccaagcaagtgtttgacatcaccattatgatcctgatt
tgcctgaacatggtgaccatgatggtggaaacagatgaccagagcgagctcaaaacctct
gtcctctacaagataaacctggtcttcatcgtcatcttcaccggcgagtgtgtgctcaag
atgtttgccctgcgccactacttcttcactgtgggctggaacatctttgacttcgtggtg
gttatcctctccatcctaggtatcgtcctctcagacatcatcgagaagtactttgtgtcc
cccaccctcttcagggtcatccggctggcgaggatcggccgcgtgctgcggctgatccga
ggcgccaaaggcatccggacactcctctttgccctgatgatgtccctgcccgccctgttc
aacattggcctcctgctcttcctcgtcatgttcatctactccatcttcggcatgtccaac
ttcgcctacgtcaagaaggagtcggggatcgatgacatcttcaatttcgaaaccttcggg
aacagcatgatctgcctctttcagatcaccacgtcagcagggtgggatgggctcctcaac
cccatcctcaacagcggccccccggactgcgaccctgagctggagaaccccgggagttca
gtgaaaggagactgtgggaaccccgccatcggcatcttcttcttctgcagctacatcatc
atctccttcctcatcgtggtgaacatgtacatcgccatcatcctggagaacttcagcgtg
gccacagaggagagcagcgagcccctctgtgaagatgattttgaaatgttttatgaaact
tgggagaagttcgacccagatgccacccagttcatcgcctacagcaccttgtctgacttt
gtggacaccttgcaggagccactcagagttcccaaacccaacaagatcaaactcatcacc
atggatctaccaatggttgctggggacaaaatccactgcctagacatcctctttgctctg
actaaggaagtgctgggagactcgggagagatggatgccctgaaggccaccatggaggag
aagttcatggctgccaacccctcgaaggtttcctatgaacccatcaccaccaccctgaag
aggaagcacgaggaggtgtgtgccaccaagatccagagggctttccggaggtacctcctg
aggcgctcggtgaagcaggcgtcctacatgtacaggcacagccaggacgagctgggcgag
gacgcacccgagaaggaagggctgatcgccaccaaaatgcaggagatctatgggaacact
gggacagatgtggacacagcccctgccctgggccttgagcccattcccagctcagagatg
ccccaggatgctcctgaggaagcacaggcttgggttaaggaacacgtggtgaaagagtcg
ctggtgtaa
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integrated database retrieval system
