Onychostruthus taczanowskii (white-rumped snowfinch): 121337007
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Entry
121337007 CDS
T07590
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04020
Calcium signaling pathway
otc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121337007 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121337007 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otc04040
]
121337007 (GRIN1)
Ion channels [BR:
otc04040
]
Ligand-gated channels
Glutamate (ionotropic)
121337007 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
121337007
NCBI-ProteinID:
XP_041262675
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKAEKVLQFDPGTKNVTALLLEAKELEARVIILSASEDDAATVYRSAAMLNM
TGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESAHISDAVAVVAQAVHDLFEKEN
ITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRK
LVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTC
REEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADG
KFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILV
KKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALT
LSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEE
RITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVR
DNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHEN
GFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKD
ARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPC
RMVPQECQRDRLAPWSQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQ
LLQLE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctcctcttctcctcgtccttcgcccgcgcc
ggctgcgaccctaagatcgtcaatatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aacgccacctccgtcacccacaagcccaacgccatccagatggccctgtccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacctgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccttactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aaccacgtcattctgatagtcagcgacgaccacgagggtcgtgctgcacagaagaagctg
gagaccctcctggaggagaaagagtccaaggctgagaaagtgcttcagtttgaccctggg
accaaaaatgtgacagcgctgctgctggaggcgaaggagctggaggccagggtcatcatc
ctctctgccagcgaggatgacgcggccacggtgtacagatcggcagccatgctcaacatg
acgggctcgggctacgtgtggctggtgggggagcgggagatctcgggcaatgccctgcgc
tacgccccggacggagtgatcggtttgcagctcatcaacggcaagaacgagtcagcccac
atcagtgacgctgtcgccgtggtggcccaggccgtgcacgacttgtttgagaaggagaat
atcacagacccaccgcggggctgcgtgggcaacaccaacatctggaagacaggacccctt
tttaagagggtgttgatgtcctccaagtattcagagggtgtcaccggccgggtggagttc
aacgaggacggggacaggaagtttgccaactacagcatcatgaacctgcagaaccggaaa
ctggtccaggttgggatttacaacggcagcaatgtcctgaccaacgacaggaagatcatc
tggccaggcggggaaactgagaaacctcaaggctatcagatgtcaaccaagttgaagatt
gtgaccatccaccaagagccctttgtgtatgtgaagcccactcaggcagatgggacgtgc
agggaagaattcaccatcaatggagatcctgtcaaaaaggtcttctgcactggaccaaat
gagaccatcccaggccgtcccaccgtggctctgtgctgctacggcttctgcatcgacctg
ctcatccgcctggcaggcgtgatgaacttcacctacgaggtccacctggtggctgatggt
aaatttggtacccaagagcgggtgaacaacagcaacaagaaggagtggaacgggatgatg
ggggagctgctgagcggccaggctgacatgattgtggctcccctcaccatcaacaacgag
cgggctcagtacattgagttctccaagcccttcaagtaccagggcctcaccatcctcgtg
aagaaggaaatcccccgcagcaccctggactcgttcatgcagcccttccagagcacactc
tggctgctggtggggctgtctgtgcatgtggtggcagtgatgttgtacctcttagaccga
ttcagcccatttggccggttcaaagtaaacagtgaggaggaggaggaagatgccctgact
ctctcctcagccatgtggttctcctggggggtcctgctgaactctggcattggagaaggt
gctccccggagtttctctgcccgtatccttggcatggtgtgggctggctttgctatgatc
attgtggcttcatacactgccaacctggcagccttcctggtgttagaccgacctgaggag
aggatcacaggcattaacgacccccggctgcgcaacccctcggataaattcatctacgcc
acagtgaagcagagctctgtggacatctacttccgacggcaggtggagctgagcaccatg
tacaggcacatggagaagcacaactacgagagcgctgccgaagccatccaggcagtgagg
gacaacaagctccacgccttcatctgggactcggcggtgctggagtttgaggcctcccag
aagtgcgacctggtgaccacgggggagctcttcttccgctccggcttcgggatcgggatg
cgcaaggacagcccctggaagcagaacgtctccctggccatcctcaagtcccacgagaac
ggcttcatggaggatttggacaagacttgggtgaggtatcaagagtgtgattcccgtagc
aatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggctgga
ggtattgttgccgggatatttttaatattcatagagatagcttacaaaaggcataaggac
gcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaacctg
caggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccacttttaggtcc
atcacctccaccctggcctccagcttcaagagacgtaggtcctccaaggatacgccctgc
agaatggtccctcaggagtgccagagagacaggctggcaccatggagccaagacagccct
gggaagcttccaccccactctgaacgtcctagcgcccaccatcacccgagctgcacagcc
tctccgcggcacatcatccccaccgccccaggaggagatgcatgtgttccccataggcag
ctcctgcaactcgagtag
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