KEGG   Onychostruthus taczanowskii (white-rumped snowfinch): 121342061
Entry
121342061         CDS       T07590                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
otc  Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03020  RNA polymerase
otc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:otc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121342061 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121342061 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otc03021]
    121342061 (POLR2D)
   03400 DNA repair and recombination proteins [BR:otc03400]
    121342061 (POLR2D)
Transcription machinery [BR:otc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     121342061 (POLR2D)
DNA repair and recombination proteins [BR:otc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121342061 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom Rop
Other DBs
NCBI-GeneID: 121342061
NCBI-ProteinID: XP_041272079
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGSDPRTADVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggcggcagtgacccgcggacggcagacgtggaggaggatgcttcgcagctc
gtcttccccaaagaatttgaaactgcggaaactctgctgaattccgaggtgcacatgctg
ctggagcaccgcaagcagcagaacgagagcgcggaggacgagcaggagctctcggaagtc
ttcatgaaaaccttgaactacacggcacgcttcagccgcttcaaaaaccgcgaaaccatc
gccagcgtgcgcagcttactgctgcagaagaagctccataagtttgaactggcatgtttg
gctaacttgtgtcctgagacagctgaggaagcaaaagctctgattcctagcctggagggc
cgctttgaagatgaagaattacagcagattctggacgacattcagactaaacgcagcttc
cagtactaa

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