Onychostruthus taczanowskii (white-rumped snowfinch): 121347056
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Entry
121347056 CDS
T07590
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03440
Homologous recombination
otc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121347056 (BRIP1)
03460 Fanconi anemia pathway
121347056 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otc03400
]
121347056 (BRIP1)
Enzymes [BR:
otc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121347056 (BRIP1)
DNA repair and recombination proteins [BR:
otc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121347056 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
121347056 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF2703
Motif
Other DBs
NCBI-GeneID:
121347056
NCBI-ProteinID:
XP_041281293
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MPSDGAEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQALYEKPGPASACDKEDRKAEPSPPCHCKCHSQPKSSEAATSGTPSAPCSAHYPDT
GTSTKPGSPLTNTECKENETLASKLSAKKKLSLCDRENDDFQVDRKRIRPLETEQQQVRK
RHCFAKGVQLVDALEVYHQRKNGELTVHSEKSMKTTTFSPQTPPGPCTECSCASGKDPDN
DPSHTKKKENGDRLCVPKIFFGTRTHKQITQISRELKRTAYSSVPMTILSSRDYTCIHPV
VSNSSNRNEMCVELLEGKHGKSCSYYHGAHKLSEPHALQSAPGLYQAWDIEDLVSLGRKL
RACPYFAARELMVGADIVFCPYNYLLDPQIRDSMDINLKDQVVILDEAHNIEDCARESVS
YGVTESQLRAAREELDFMVSNSIRQKHHEPLRAVCCSLINWLQESSGQLVERAYETACKV
WSGKEMLNFFYKMGITGINFPVLQKHLVAVLEKEEKVSMHGREEIIEVPIVSPATQIMLK
GLFMVLSCLFKENSRFADDYRVALQQTYTWMTEDQRDGADTSSFFTRPKHKKSSRQKTLV
HMLNFWCLNPAVAFSDLNEVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW
VGTVGAGPSGRQLCATFQHTETFDFQDEVGALLLAVCQTVGQGILCFLPSYKMLDKLKDR
WMHTGLWKKLEDVKTVIAEPQGGAKSDFDELLKIYYDAIKYKGEKDGALLVAVCRGKVSE
GLDFCDENARAVVTIGIPFPNVKDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRKNPNKYITGLSKWIRQQVRHHGTFGSALQSLRAFALR
NQRGGEPSSEPSPELPAQPRHLSQGSQQEASPPLSPDVRAKSQEQNVASEVHFTASISSA
RPAAWDLPSDSMAAVKQSEQKVDVESHSHHVKQRRKRTDCTPKMAAIKIEREKMNGWSNA
DVVEENCCSEPLTSTPVAQNCRATASSSQEHVNGPSDLIDHFNQCQSSLIAEHKPSGPES
CLETTHFSVKSAEASGAEGHQLPAEPCREFPSAAGRAEPSALDEDEDEDESIYFTPELYD
DADPEEQRTEPPVPACCTTGSWLECGNSTVPADPSATNTSETHTGTEKAEAGRGPHGIME
DVRSRDSAAGAVGVAAAAGAEQGGAQEMDTPKRKISLSRSRNKGVSSFLLGNSGTC
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgatggggcagagtacacaattgggggggtgaagatcctcttcccctgcaag
gcttacccctcccagctcgccatgatgaacgctattgttaaaggcttgaataacaggcag
cactgtttgctggagagccccacaggaagtggcaaaagcttggctttactttgttctgca
ttatcatggcagcaggctttgtatgagaaaccggggccagcctcggcgtgtgacaaggag
gacaggaaggcggagccatctccaccgtgtcactgcaagtgtcactcccagcccaagagc
agcgaggctgcaacgagtgggactcccagtgctccttgttctgcccattatcctgacaca
ggaacttccacaaaacctggaagcccgctgacaaacacagaatgtaaggaaaatgaaaca
ctagcttcaaagctgtctgccaaaaaaaagttatctctctgtgacagagagaacgatgat
tttcaagtggacaggaagaggattcgtcccttagaaacagagcagcagcaggttagaaaa
cgccactgctttgcaaaaggagtgcagttggttgatgctttggaagtttatcatcagagg
aaaaacggagagctgactgttcactctgaaaaaagcatgaaaaccactactttttctccc
caaacacctcctggcccttgcactgagtgttcctgtgcttctgggaaagaccctgataac
gatcccagtcacacaaagaagaaagagaacggagatcggctgtgtgttcccaaaattttt
tttgggacacgaacacacaagcaaataacccagatcagcagggagctgaagaggacagcg
tattcctctgtccccatgacaatcctttccagcagggattacacctgcattcatccagtg
gtgtccaacagtagtaacaggaatgaaatgtgtgtagaattgctggaaggaaaacatggc
aagtcctgctcttattaccacggtgctcacaagctcagtgagccccatgccctgcagtct
gcacctgggctgtaccaggcctgggacattgaggacctggtgagcctgggcaggaagctt
cgtgcctgtccctattttgcagccagggagctcatggtgggggcagacatcgtgttctgt
ccctacaattatctcctggacccacagatccgggacagtatggacattaacctaaaagac
caagtagtcattttggatgaagcccacaacattgaggactgtgctcgggagtccgtgagc
tacggggttaccgagagccagctccgagctgcccgagaggagctcgatttcatggtcagc
aacagcatcaggcagaagcaccacgagcccctccgagctgtgtgctgctccttgataaac
tggttacaggagagctctgggcagctggtggagagagcctatgaaactgcctgtaaggtg
tggagtggcaaagaaatgctcaactttttctacaaaatgggaataactggcattaatttt
cccgttttacagaaacatcttgttgctgtcctggaaaaagaagaaaaagtatctatgcat
gggagagaggaaattattgaggtgccaattgtgagccctgccacgcagatcatgctcaaa
ggcctgttcatggtcctttcctgtctcttcaaagagaacagcaggtttgcagatgattac
agggttgctctacaacaaacttacacctggatgactgaagaccaacgtgatggtgcagat
acaagttccttcttcacgaggcccaagcacaaaaagagttcaaggcagaaaacccttgtc
cacatgctgaatttttggtgcttgaaccctgctgtggctttttctgacttaaatgaagtt
agaacaattgttctgacatcaggcacactctctcccatggattccttttcctcagagctt
ggagtgaagttttccattcagctggaggcgaatcacgttatccggaattcccaggtgtgg
gttggcacggtgggcgcgggccccagcgggcggcagctctgtgccaccttccagcacacc
gagaccttcgacttccaggacgaggtgggagccctgctgctggcagtctgtcagacagtt
ggccaaggaattttgtgctttttgccctcctataagatgctggacaagttaaaggatcgt
tggatgcacactggcttgtggaagaagctggaggatgttaaaacagtcattgcagagccc
cagggaggggccaagagtgactttgatgagctgctgaaaatctactatgatgcaatcaaa
tataaaggagaaaaagatggggctctcctggtagctgtgtgcagagggaaggtcagtgag
gggctggatttctgtgatgagaacgccagggcagtcgtgaccatcggaatccccttccca
aacgtgaaggacctgcaggttgaattaaagaggaagtacaatgaccagcacaaaagtaca
agaggccttttatcagggagccagtggtatgaaattcaagcttacagagctctcaaccaa
gccctgggaaggtgtataaggcacaggaatgactggggggctcttattttagttgacgac
cgcttcaggaagaaccccaataaatacataactggactgtccaagtggatccggcagcag
gtgcggcaccacggcaccttcggcagcgccctgcagtccctgcgcgccttcgccctccgc
aaccagaggggtggggagccttcctcagagcccagccccgagctccctgcacagcccagg
cacctctcacagggctctcagcaagaggccagccctcctctgtcccctgatgttcgtgct
aaaagtcaggagcaaaacgtggcctcggaagttcattttaccgcaagcatcagctcagct
cgtcccgcagcgtgggatctgccaagtgacagcatggcagcagtgaagcagagtgagcag
aaagttgatgtagagagccattctcaccatgtaaaacagagaagaaaacgtacggactgc
acccccaaaatggcagcaattaaaatagagagagaaaaaatgaatggttggagcaatgct
gatgttgtggaagagaattgctgctctgaaccactgacttcaactcctgtagcccagaac
tgcagggccacagcaagcagcagccaggagcatgtgaatgggcccagtgaccttattgat
catttcaatcaatgccaatcgtcattaattgcagagcataaaccaagtggaccagaatca
tgcttggaaacaactcatttttcagtgaagagtgctgaggcctcaggtgctgaaggacat
cagcttccagctgagccctgcagggagttcccttcagcagcagggagagctgagccttca
gcattagatgaggatgaggatgaggatgaaagcatttacttcactccagaactctatgat
gatgcagacccagaggagcagagaactgagcccccagttccagcctgttgtaccactggg
agttggctggaatgtgggaactccacagtccctgctgatccttctgccaccaacacctca
gaaacacacactgggactgaaaaagctgaggctggcagaggtccccatggaatcatggaa
gatgtgaggagcagggacagtgcagctggtgctgtaggggtggcagctgcagcaggagca
gagcagggaggagctcaggagatggacacccctaaaaggaaaatcagcctctccagatcc
cgaaataaaggtgtgtcatcctttctgctgggcaatagtggcacctgctga
DBGET
integrated database retrieval system
