Oryzomicrobium terrae: OTERR_24890
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Entry
OTERR_24890 CDS
T06190
Symbol
kdsD
Name
(GenBank) arabinose-5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00540
Lipopolysaccharide biosynthesis
otr01100
Metabolic pathways
otr01250
Biosynthesis of nucleotide sugars
Module
otr_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
OTERR_24890 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
otr01005
]
OTERR_24890 (kdsD)
Enzymes [BR:
otr01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
OTERR_24890 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
otr01005
]
Lipid A
OTERR_24890 (kdsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
PNP_UDP_1
DUF6293
DUF2529
Motif
Other DBs
NCBI-ProteinID:
QEL65965
UniProt:
A0A5C1EB48
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All DBs
Position
2806774..2807772
Genome browser
AA seq
332 aa
AA seq
DB search
MTSALPPVAKATPQALELARQVLRIEADAVAALIGRIGADFLAAVDLVLACKGRLIVSGM
GKSGHIGRKIAATFASTGTPAYFVHPAEASHGDLGMITGEDVVVALSNSGESEELVRIVP
ILKRQGAKLIAMTGNPASSLGRQADVHLDAAVAQEACPLGLAPTASTTAALALGDALAVA
VLDARGFGPDDFARSHPGGTLGRRLLTHVRDVMRPQEAVPTIGPDASLADAVLATSRGGL
GMTAVVDAAHRVLGIFTDGDLRRTFEKKLDFNTVAIADVMTRTPRTIGPEKLAVEAVEMM
ERHHINQLIVTDPAGQLLGALNMHDLFRAKVI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcattgcctcccgttgccaaggcaactccccaagcgctcgaactggcccgc
caggttctgcgcatcgaggccgacgcggtcgcggcgctaatcgggcgcatcggcgccgat
tttctcgccgccgtggatctggtgctcgcctgcaagggtcgcctgatcgtctcgggcatg
ggcaagtccggccacatcggccgcaagatcgccgccaccttcgccagcaccggtaccccg
gcctacttcgtccatcctgccgaagccagtcacggcgatctgggcatgatcaccggcgag
gacgtggtggtcgccttatccaattccggcgagtccgaggaactggtgcgcatcgtcccc
atcctcaagcgccagggcgccaagctgatcgccatgaccggcaacccggcctcgtccctg
gggcgccaggctgatgtgcacctggatgcagcggtcgcgcaggaagcctgccctctgggg
ctggcccccaccgccagtaccaccgccgccctggccctgggcgatgccctggccgtggcc
gtgctcgacgcccggggtttcggcccggacgacttcgcccgctcccaccccggcggtacc
ctgggccggcgcctgctcacccacgtccgtgacgtgatgcgcccgcaggaggccgtgccg
accatcggtcccgatgccagcctggccgacgcggtactggccacttcccgtggcggcctg
ggcatgacggcggtggtcgatgcggcgcaccgcgtcctgggcatcttcaccgacggcgac
ctgcgccgcaccttcgaaaagaagctcgatttcaacacggtggccatcgccgatgtgatg
acccgcacgcctcgcaccatcgggccggaaaagctggccgtggaagccgtcgagatgatg
gaacggcaccacatcaaccagctgatcgtcaccgaccccgccggccagctcctcggcgca
ctgaacatgcacgacctgttccgcgccaaggtcatttga
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