Oncorhynchus tshawytscha (Chinook salmon): 112215274
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Entry
112215274 CDS
T05605
Name
(RefSeq) transcription factor E3-like isoform X1
KO
K09105
transcription factor E3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112215274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112215274
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
112215274
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Diphtheria_T
DUF4032
Motif
Other DBs
NCBI-GeneID:
112215274
NCBI-ProteinID:
XP_042155766
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All DBs
Position
LG16:86275309..86295483
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AA seq
460 aa
AA seq
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MTSRVLMRQELMRQQARDQERREAQQQVSSAQLHTTDSSPAISMAPEHTEARPPPAQVPV
EVLKVQTYLENPTKYHLQASQRQQVKHYLSSTVGNKLTNQTLGASPSPHSGSAPELQPAA
SSSPSSPLAVLSLSSNKEEMEDVIDGIISFESGLNDEFFQLIDPGLQLANTLPVSVNMLD
VFSSGGMAAPTITVSNSCPADLHTIKTELTGTVVEAKAMMKERQKKDNHNQIERRRRFNI
NDRIKELGALIPKSSDPPPCYGDRETRWNKGTILKASVDYIRRLQKEQQRAKEVETRQRK
LEHSNRSLLLRIQELEMQACLHGLSTPASSSQGSSSSHLSLSQSLDPSTGDALSKTLLSL
SGGPGLQATSPSFLSPPPSASPVGLMNMASPLGFSELDDPSAAAFHSSLLPDMGLGDILM
DHGGIGMSPVWAREPLLSSISPGVSKTSSRRSSFSMEEDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcgggtgttgatgaggcaggagctgatgcgccagcaggccagggaccaggag
aggagagaggcccagcagcaggtctcctcggcccagttacacaccaccgactcctcccca
gccatctccatggccccagagcataccgaagcccgaccaccccctgcccaggttcctgtg
gaggtcctcaaggttcagacctacctggagaaccccactaagtaccacctccaggcctcc
cagagacagcaggttaaacactacctctcctccaccgtggggaacaaactgaccaatcag
acgctgggcgcctccccctcacctcactccggatccgcccctgagctccagcctgcagcc
agcagctctcctagcagcccattggctgtgctcagcctgagctccaacaaagaggagatg
gaagatgtgattgatggcatcatcagttttgaatccggtctcaacgatgagttctttcag
ttgatcgaccctggactacagctagccaacacgctaccagtgtcagtgaacatgctggat
gtgttcagcagtggagggatggctgctcctaccatcaccgtctccaactcctgtcctgct
gacctgcacaccatcaagactgagttaactggtaccgtggtggaggctaaagctatgatg
aaggagcgacagaaaaaggacaatcataaccagattgagagacggaggaggttcaacatc
aacgatcgcatcaaggaactgggagctctcatccccaaatctagtgacccacccccctgc
tacggagacagggagacgcgttggaacaagggcaccatcctgaaggcgtctgtggactac
attaggaggctgcagaaggagcagcagagagccaaggaggtggagaccagacagaggaaa
ctggagcacagcaaccgcagcctactgctacgtatacaggagctagagatgcaggcctgc
ctccacggcctctccacccccgcctcctcctcccagggctcctcctcctcacacctcagc
ctatcacaatccctggaccccagcacgggcgacgccctctccaagaccctcctctccctg
agtggtggcccaggccttcaggccacctccccctcctttctgtctccacccccctcggcc
tcaccggttggcctgatgaacatggcttctcctctgggcttctctgagctggacgaccca
tctgccgcagccttccactcctccctgctaccggacatgggtcttggggacatcttgatg
gaccatggggggatagggatgtccccggtgtgggcgcgagagcccctgctctcctccatc
tccccaggagtttccaagacctccagccgcaggagcagcttcagcatggaggaggacttg
tga
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