Oncorhynchus tshawytscha (Chinook salmon): 112215851
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Entry
112215851 CDS
T05605
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00531
Glycosaminoglycan degradation
otw01100
Metabolic pathways
otw04142
Lysosome
Module
otw_M00076
Dermatan sulfate degradation
otw_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112215851 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112215851 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
otw02042
]
112215851 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112215851 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112215851 (si:dkey-72l14.3)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
112215851 (si:dkey-72l14.3)
Bacterial toxins [BR:
otw02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
112215851 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Enzymes
112215851 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Enzymes
112215851 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
112215851
NCBI-ProteinID:
XP_024231051
LinkDB
All DBs
Position
LG16:50759956..50765462
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AA seq
512 aa
AA seq
DB search
MAWTELELRAGLRAGPHRALLPLLLQGLMLLTSPCLGGPPQPARTPLSPGQPFLVLWGIP
NKACPGRPDPGAFGMEREGRVSMFYEDTLGKYPYYTNQDQPVNGGLPQHTRLDGHLQKTG
EDLAAALPSIGYQGLGVLRWGQWSPQWGRNREKQGIYLEGSRALLRTFFPDWTTEEVEKW
SQVDFEAASQSILMETLWEVRRLRPKALWGVTPYPNCYNSGPAQSLSNYTGRCPAAEMAL
NDELLWLWKCCSALYPALTLEKLQGGTSGARLYTSNQIREALRVASLAGTAYDLPVFPLV
RSVYTSTNTFLSEVDLVNTIGESAAMGAAGVVLWEKDQGVFSTRTQRACSELAAFVREVL
GLYAVNVTTATRLCGISLCQGRGRCVRRKPESSAYLHLPPSNFVMTQGKVEGVQATGQLD
PGNLEAWKRDFQCQWYESLEGAVADEELPKDRAQGVLPPTLNSPLSNELNQGTRPTLALS
DHSGPSLKAPLLPLLLVLATALRLNTDLCLKL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggactgagctggagctccgggccgggctcagagctgggccacacagggcccta
ctaccactcctcctccagggattgatgctccttacatccccctgccttggtggtccccca
cagccggcacgcacccctctgtcaccagggcagccttttctagtactatggggaatcccc
aacaaggcgtgtcctgggcgacctgacccaggagcctttgggatggagagagagggccgc
gtgtccatgttttatgaggacactctggggaagtacccctattacactaaccaggaccag
ccggtgaacggaggccttccccaacacaccagactggatggacacctccagaagacagga
gaggacctggcggcagcgctaccatcaataggttaccagggcctgggagtactgcgttgg
ggccagtggtccccgcagtggggaaggaaccgtgagaaacagggcatctacctggagggc
tccagggctctgctgaggaccttcttccctgactggaccacggaggaggtggagaagtgg
tctcaggtggactttgaggcagcgtcccagtccatcctcatggagacgctgtgggaggtg
aggaggctccgccccaaggctctgtggggcgtgaccccataccccaactgctacaactcc
ggccccgcccagtcgctgtccaattacacgggtcgctgtcccgccgccgagatggcgttg
aatgacgagctgctgtggctgtggaaatgctgctctgctctctaccccgccctcacacta
gagaagctgcagggtgggacctcaggggccagactgtacacgtccaatcagatccgagag
gcactgagagtggcaagcttggctgggaccgcctacgaccttcctgtgttcccattggtc
aggagtgtctatacatcgaccaatactttcctgtctgaggtggacctggtcaacaccatt
ggtgagagtgctgccatgggggcagcaggggttgtcctctgggagaaagatcaaggtgtc
ttctctacaaggactcagagagcctgctcagagctggccgcgtttgtgcgtgaggtcctg
ggcctttacgccgtcaacgtgaccacggccacccgcctgtgcggcatctccctgtgccag
gggcgtggccgctgcgtgcgccgcaaacccgagagctccgcctacctgcacttgccgccc
tccaacttcgtgatgacgcaggggaaggtggagggggtgcaggccacaggccagctggac
cctggcaacctggaggcctggaagagggacttccagtgccagtggtatgagtccctggag
ggggctgtcgccgacgaggagctccccaaggacagggcacagggagtccttccccccacg
ctgaattcccccttgtcgaatgagctgaaccaagggaccaggcccaccctcgctctgtca
gaccacagcggaccatcactcaaggcacctctcctacctctactgctggtattagccaca
gctctacgcctgaacacagacttatgcctgaagctctga
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