Oncorhynchus tshawytscha (Chinook salmon): 112216009
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Entry
112216009 CDS
T05605
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112216009 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112216009 (lamb2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
EzrA
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
112216009
NCBI-ProteinID:
XP_024231332
LinkDB
All DBs
Position
LG16:58360360..58401457
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AA seq
1797 aa
AA seq
DB search
MHASLVMFICALAYATAREPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKDPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMIFKTFRPAAMVIERSADFGRNWQVYRYFAYDCASVFPGVSKGPLRK
VDDVICESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHSDMPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLATGNAAGGVCDHC
LHNTMGRNCEMCKPFYYKDLSRDIRDPGVCTACDCDPDGSLNGGICDGHDEPSLGMIAGQ
CRCKDHVEGHRCDKCKSGFFGLSAANPRGCQPCQCDPRGTVSESPKCDPVSGDCFCKRLV
TGRSCDLCLPEHWALSHDMNGCRDCDCDVGGATDNHCSMENGQCRCRSHMMGRQCTQVES
GWYFMALDHYTYEAELAILGQGCSVEQREHQPGRPATWTGTGFAKVPEGSSLEFSINNIP
YSMEYDLLIRYEPQMPRDWGEVRVTIIRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPPPVCMERGVSYTLRFEFSRYLDGNSILILGTTAANILVDSISLIPRYSSLEMFIGGDP
ASIARKQSYERYRCHEGAKSVTRPQISNVCAKLITSMSAIINHGALPCLCDPQGSVSSVC
DTHGGQCRCRPNVIGLRCDQCAPGTYGFGPAGCKACECNLEGAVTRSCDQLTGQCPCRPG
AFGQRCDGCQAGHWGFPNCKRCLCNGHAEECHQRTGACLNCRDNTGGDKCDRCANGYYGN
PVLGTGMGNQCRACPCPDGPNSGRHFAASCYQDNRNRQVVCNCNQGYTGGMVKRSEGSFK
RSRCEECAPGYYGNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPDCGV
CKSGYYGDASRRNCRKCTCSFLGTEHTQCTARDECVCQRATGQCQCLPNTIGLTCDHCKP
NYWNLASGRGCEACGCDPNNAVNSACNEFTGKCQCRDGFGGKTCTDCQENYWGDPRIQCR
VCDCDPRGIETSQCDQKSGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVV
QDLAVRTKTLSERAQEIQTTGLTGAYEKAFRDLEKKLAQAQGIVNARNTTAEAVSSLMEL
IEDLRSQIGETTDTLNRLEGDLTSVQNSNVEASNELSALEREAKQLNLTSDQLHRQLDIL
KNSNFLGAYDSIHSSYNKSRDAERRANQSTTTTPSTVSQSADTRRKTERLISAKKDDFNR
KNAANKRALGDLNAKAQTLDMKKINEKVCGTPGDAPCAESLCGGAGCRDDEGNRHCGGLN
CNGAVAMADNALERSKHAEKELNKAMGEVEELFHKVADAKTKAEEAKSKAQAALDKATNT
KNKVERSNNDLRDLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKD
RVRSLSNVDAILQQTQDDVRKAEQLLQEAKKARNRAEGVKSTAETVKQALEDAKKAQATA
EKAIQRARADIGETEARLAQIESETSSSEHDLNDAMDRMGNLGREINALKLKRAHNSVAA
ARAEETATMARDKANEAKQILDGELMDKYHTVQELVDTKAKTVQEAKKKAERLRDEAKEL
LKDAQNKLQRLAELEKDYEENQKTLEGKAQQLDGLEDKMKAILNDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtcactggtaatgttcatatgtgccctggcatatgccactgcccgggagcca
gaccacgcccacggctgtacccatggcagctgttacccggcaacaggagacctgttggtg
ggccgtgagaagagcctgaaggcatcatctacatgcggctccaggaagaaagacccctac
tgcatcgtcagtcacttacaggatgagaagaaatgtttccagtgtgactctcgccgccca
tatgatcctgtctacaacaccatcagtcaccgcattgagaacgtcatcaccacgttcaaa
ccacaccgcaagaagtcatggtggcagtcggagaatggaaagcctgatgtcttcattcag
ctggaccttgaggcagaattccattttactcatcttatcatgatcttcaagacatttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaactggcaggtgtaccgc
tactttgcctacgactgtgcctcggttttccccggggtatctaagggacccctacgcaaa
gtagacgacgtcatctgtgagtcgcgctactctgacatcgagccgtccacagagggagag
gcaatctacagagttctggaccctgccatccacattgaggacccctacagccccaacatt
cagaaccagctgaagatcactaacctgcgtgtgaacttcaccaagctgcacactctggga
gataacctgctggactcccgcgtggagatcaaggagaagtactactatgccatgtacgag
ctggtcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccatgggaggtgtgtctgcaagcacaacacgaag
ggtctgaattgtgagctgtgtgatgacttccatagtgacatgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgtaactgtaacggccactccaaccagtgtcac
tttgacatggcggtttacttggccacgggcaatgccgccggtggcgtctgtgaccactgt
ctccacaacaccatgggacgcaactgtgagatgtgtaaaccattttactacaaggacctc
agtagggacatcagagaccccggggtctgtactgcctgtgactgtgatcctgatggttcc
ctgaatgggggcatctgtgacgggcatgacgagccatccctgggcatgatcgctgggcag
tgccgctgtaaggaccacgtggaagggcatcgctgtgacaaatgcaagtctggcttcttt
ggcctgagtgcagcaaacccccgcggctgccaaccctgccagtgtgaccccaggggtact
gtgtcagagagcccaaaatgtgaccctgtgagcggggactgcttctgcaagcgactggtc
accgggcgcagctgtgacctgtgtctgccagaacactgggcactgagtcatgacatgaat
ggctgcagagactgtgactgtgatgtgggcggagccacagataaccactgctctatggag
aatggccagtgccgctgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
ggatggtacttcatggctctggaccactatacctatgaggctgagctggccatattggga
cagggctgtagtgtggagcagagggagcaccagcctgggcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttctccatcaacaacatcccc
tactccatggagtacgacctcctcatccgctatgagccacagatgccacgggactggggg
gaggtccgtgtgacgatcattcggccagggcccattcccaccagcagcccttgtggaaac
accatccctgcagacgacatgctcactgtgtccctgcctgcaggatccaggtttgtcgtg
ctgcctccacctgtatgcatggagagaggagtgagctacactcttcgctttgagttcagt
cgctatctggatgggaacagtattctcattcttggtacaaccgctgccaacattttagtg
gactctatctccctgatccctcgttactcctccctggagatgttcattgggggtgacccc
gcctccatcgctaggaagcagagctacgagcgctaccgctgccacgagggggccaagagc
gtgacacgcccccagatcagcaacgtctgtgccaaactcatcaccagcatgtcagccatt
attaaccatggagccctgccttgcctgtgtgacccccagggctcagtcagctcagtgtgt
gacacgcacggaggtcagtgccgctgtaggccaaacgtgattggacttcgctgtgaccag
tgtgctcctgggacgtacggctttggacctgcaggatgtaaagcatgtgagtgcaatctg
gaaggtgcggtcactcggtcctgtgaccagttgactgggcagtgcccgtgccgcccgggt
gcgttcggccagcggtgcgatggctgccaggcaggacactggggcttccccaactgtaag
cgatgcctgtgtaatggacatgctgaggagtgccaccagaggaccggagcctgtctcaac
tgcagggacaacactggaggggacaaatgtgacagatgtgccaacggatactacggcaac
ccagtgttgggcacaggtatgggtaaccaatgtcgggcctgtccttgcccagatggccca
aacagcggacgccacttcgctgcctcctgttaccaggacaaccgcaacagacaggtggtc
tgtaactgtaaccaaggatatacaggggggatggttaagcgctccgagggttctttcaag
cgttcccggtgtgaggagtgcgcccctggttactacggtaacccctcccagccaggtggg
cggtgccagccgtgcaggtgcagtaataacattgacatgtcagatctggatgcgtgtgac
cggaggacaggagagtgtaagaagtgtctctacaacacagagggaccggactgtggcgtg
tgcaagagcggttactatggagacgcctcgcgacgcaactgcagaaagtgcacctgtagc
ttcctgggcacagagcatacccagtgtacagcgcgggatgagtgtgtctgccagcgtgcc
acggggcagtgccagtgtttacccaacaccatcggcctgacatgtgaccactgtaaaccc
aactactggaacctggctagtgggcggggctgtgaggcctgcggctgtgaccccaacaat
gctgtcaactcggcctgcaacgagttcactggaaagtgtcagtgtcgtgatggattcggt
ggaaagacctgcacagactgccaagagaactactggggagaccccaggatccagtgcaga
gtctgtgactgtgaccccaggggcatagagacatcccagtgtgaccagaagtcaggccac
tgtgtgtgtcagcagggggtgtcaggcgtgcgttgtgaccagtgtgcgaggggcttctca
ggccagttccctaactgccagccttgccaccagtgctttggggactgggaccgggtggtg
caggacctggctgtccgaaccaagaccctgtcggaacgggctcaagagatccagaccacg
ggcctgactggagcctatgagaaggccttcagagacctggagaagaagctggcacaggcc
cagggcatcgtcaacgcccgcaacaccaccgcagaggcagtcagcagcctgatggagctc
attgaagacctcaggtctcagataggtgagactacagacacactgaatcgtctggaggga
gacctgaccagtgtgcagaacagcaacgttgaggccagtaatgagctcagtgctctggag
agagaggccaaacagctaaacctgacctcagatcagctccaccgtcaactggacatcctc
aagaactccaacttcctgggtgcatatgacagcatccacagctcctataacaagtcccgt
gatgcagagcggcgagccaaccagtcaaccaccaccacgcccagcactgttagccaatca
gcagacacacgccgcaagacagaacgcctcatctctgccaagaaagatgacttcaaccgt
aagaacgctgccaacaagcgagccctgggggacctcaatgccaaggctcagaccctggac
atgaagaagatcaatgagaaggtctgtgggacccctggcgatgccccctgtgcagagagc
ctttgcggaggagcaggttgccgtgacgatgaggggaataggcactgcggaggcctgaac
tgcaacggtgccgtagcgatggcagataacgccctggagaggtccaagcacgcagagaaa
gagctgaacaaagccatgggggaggtagaggagctcttccacaaggttgcagatgccaag
accaaggcggaggaggcgaagagtaaagcccaggcagctctggacaaggccaccaacacc
aagaacaaggtggagcgctccaacaatgacctgcgggacctcatcaagcagatccgggac
ttcctcatgcaggagggtgcggatccagacagcattgagacggttgccaaccgtgtcctg
gagctgtccatcccagcctcaccacagcagatcagacacctggcagaggagatcaaggac
cgggtccggagcctctccaacgtagacgccattctgcaacagacacaggacgatgtgcgc
aaagcagagcagctgctacaggaggccaagaaggccaggaatcgggcagagggggtgaaa
tccacagcagagacagtaaaacaggcacttgaggatgctaagaaggcccaggccacagca
gagaaggccatacagcgggctcgggctgacattggtgaaacggaagctcgactagcacag
attgagtctgagacctcaagcagtgaacatgacttgaatgatgccatggaccgcatgggc
aacctaggtcgggagattaatgctctgaagctcaaacgtgcccacaacagcgtggcagca
gctcgagctgaggagacagccactatggcacgggacaaagccaatgaggctaagcagatt
ttagatggtgagctgatggataagtatcacacagtgcaggagttggtggacacgaaagcc
aagaccgttcaggaggcgaagaagaaagcagagcgcctaagagacgaagccaaagagcta
ctgaaggacgcccagaacaagcttcagagactagcagagctagagaaagactatgaagag
aaccagaaaacgttggagggcaaagcccagcagctggacggcctagaagacaagatgaag
gctatcctcaacgacatcaacaaacagatccagatctacaacacctgtcagtaa
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integrated database retrieval system
