Oncorhynchus tshawytscha (Chinook salmon): 112217167
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Entry
112217167 CDS
T05605
Name
(RefSeq) hyaluronidase PH-20-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00531
Glycosaminoglycan degradation
otw01100
Metabolic pathways
otw04142
Lysosome
Module
otw_M00076
Dermatan sulfate degradation
otw_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112217167
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112217167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
otw02042
]
112217167
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112217167
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112217167
Enzymes [BR:
otw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
112217167
Bacterial toxins [BR:
otw02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
112217167
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Enzymes
112217167
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Enzymes
112217167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
112217167
NCBI-ProteinID:
XP_024233224
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All DBs
Position
LG17:complement(12474421..12491001)
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AA seq
462 aa
AA seq
DB search
MALTPVIRKCFERLVMGHTKPFIVTWNIPKLVCNRYNISLDTSPYRGVATPAKVPGQFLS
LFYTDRLGLYPHVDLPSRQQFYGGIPQRGNLRASLAKARADINYYIPSKTARGLAVIDWE
DWRPLWARNWGSKWIYRTLSVTHARQRDRSLTAWRATATAKKQFQAAARSYMAETLSLGS
RLRPNYQWGFYLFPNCYNHGWMVPGYTGRCTKEVMGQNDELLWLWEASSALYPSIYLQAS
LGDRHSAALLVRNRVQEALRVSALPARPTTAPVYVYTRPVFIDQNRRFLSQGDLVSTIGE
SAAVGASGAVLWGASADYDDKASCQALSSYLTTTLNPYVANVTAAAQLCGDFLCQGNGRC
VRKHYESDHYLHLSSGNFRILRARGTYMVLGTPSLADLTLFSRRFTCQCYAGRTCSPKLP
IHLSKALVFRLKHQGLSDKTKTLNKVIADMEQSTIKENLKKH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaccccggtaatcaggaagtgcttcgagaggcttgtcatgggccacaccaag
cccttcatagtgacctggaacatcccaaagctggtctgtaacaggtacaacatctccctg
gacacctccccctacagaggcgtggccacacctgccaaggtgccaggtcagttcctgtct
ctgttctatactgaccgactggggctctacccccacgtggacctgccttccaggcagcag
ttctacggaggcatcccccagagaggaaaccttagggccagtctggccaaggccagggct
gacatcaactactacatcccctccaagacggcccgtggcctggctgtgatcgactgggag
gactggcgccccctgtgggccaggaactggggctccaagtggatctacaggaccctatca
gtgacccatgcccgccagagggaccgctccctcacagcctggcgggccacggctacggcc
aagaagcagttccaggcagcagcccgcagctacatggcagagactctgtccttgggtagc
cgcctcaggcccaactaccagtggggattctacctgttccccaactgttataaccatgga
tggatggtgccgggatacacagggagatgtaccaaggaggtgatggggcagaatgatgag
ctgctctggctgtgggaggcaagttccgcactctacccctctatatacctgcaggcgtct
ctaggggacaggcatagcgccgccctcttggtgagaaaccgagtccaagaggcgctgagg
gtgtctgccctgcccgcccggcccaccaccgcacccgtctacgtgtacacacgacccgtc
ttcatcgaccagaacagacgcttcctcagccagggggacctggtcagcaccatcggggag
agtgctgccgtgggagcctcaggagccgtgctgtggggggccagtgccgactacgatgac
aaggcgtcctgtcaggctctttcctcgtacctcaccaccacgctcaacccctacgtcgcc
aacgtgacagccgccgcccagctctgcggcgacttcctgtgccaggggaacgggcgctgc
gtacggaagcactacgagtcggaccactacctccacctgtcctcagggaacttccgtatc
ctccgggccaggggcacgtacatggtcctggggacgcccagtctggctgacctgactctc
ttctccaggaggttcacctgtcaatgctatgcaggacggacatgttcccccaagctgccc
atacacctgtctaaagcactggtgtttagactgaagcatcagggtctgtccgacaagact
aagacactgaataaagtgatcgctgatatggaacagtcaaccattaaagagaacttgaaa
aaacactga
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