Oncorhynchus tshawytscha (Chinook salmon): 112217720
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Entry
112217720 CDS
T05605
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112217720 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112217720 (esr1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112217720 (esr1)
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3A. Estrogen receptor
112217720 (esr1)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
112217720
NCBI-ProteinID:
XP_024233971
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Position
LG18:complement(23436457..23459289)
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AA seq
623 aa
AA seq
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MLVRQSHTQISKPLGAPLRSRTTLESHVISPPKLSPQQPTTPDSNMYPEETRGGGGAAAF
NYLDGGYDYTVPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPQ
LSPFLHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSAAGSG
VRVFEMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRN
RRKSCQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGDREKPYGDLEHRTAPPQ
DGGRNSSSSSLNGGGGWRGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLL
TSMADKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQ
DLILDRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSV
ESLHNSSAVESMLDNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLY
SIKCKNKVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMRGSQDT
HIRSPGSGVLQYGSPSSDQMPIP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacgtcatctcccccccaaaactctcaccacagcagccgacc
acccccgacagcaacatgtaccctgaggagacacgcggaggtggtggggcggccgccttt
aactacctggacggagggtatgactacacagtccctgcccaaggcccggcccctctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagcccccag
ctcagccccttcctccaccccccaagccaccatggtctccccagccagtcatactacctg
gagacctcgtccacacccttatacaggtcgagtgtggtaaccaatcagctgtcagcgtca
gaggagaagctctgcatcgcctccgataggcagcagtcgtacagtgcagcagggtcaggg
gtcagggtgtttgagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcc
tctgggtaccactacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagc
atccaaggtcacaatgactacatgtgccctgcgactaaccagtgtacaatggacaggaat
cgtaggaagagctgccaggcatgccgcctcagaaagtgttatgaagtggggatggtgaaa
ggaggcttgcgtaaggaccgcggtgggcgggttctcaggaaggataagcggtattgtggc
cctgctggtgacagagagaaaccctacggtgacctggagcacaggacggcgccccctcag
gacgggggtaggaacagcagcagcagcagtctcaatggtggtggaggatggcgtgggccc
agaatcaccatgcctcctgaacaggtgctgttcctgctgcagggggcagagcctccggcc
ctgtgttctcgtcagaaggtggcccgcccctacacagaggtcaccatgatgaccctgctc
accagcatggctgacaaggagctggtgcacatgatcgcttgggctaagaaagtaccaggt
ttccaggagctgtctctccatgaccaggtgcagctgctggagagttcctggctggaggtg
ctgatgatcggactcatatggcggtccatccactgccctgggaaactcatcttcgcccag
gacctcatactggacaggagtgaaggggactgtgtggagggtatggctgagatcttcgac
atgctcctggccactgtgtctcgcttccgcatgcttaaactgaagcctgaggagtttgtg
tgcctcaaagccatcatcttgctcaactctggtgccttctccttctgttctaactctgtg
gagtccctccacaacagctcggcagtggaaagcatgctggacaacatcacagacgccctc
atccaccacatcagccattcaggagcctctgtgcagcagcagcccagacggcaggcccag
ctcctgctcctgctctcacacatcagacatatgagcaacaaaggcatggagcacctttac
agcataaaatgtaagaacaaagtgcctctgtacgacctgctcctggagatgctggacggt
caccggctccaatccccaggcaaagtggcccaagctggggaacagaccgagggcccctct
accaccactaccacctccacaggctccagcatagggccgatgcgaggcagccaggatacc
cacatcagaagccctggttcgggggtactccagtatggctcccccagctcagaccagatg
cccattccgtga
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