Oncorhynchus tshawytscha (Chinook salmon): 112220044
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Entry
112220044 CDS
T05605
Name
(RefSeq) hyaluronidase-4
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00531
Glycosaminoglycan degradation
otw01100
Metabolic pathways
otw04142
Lysosome
Module
otw_M00076
Dermatan sulfate degradation
otw_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112220044
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112220044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
otw02042
]
112220044
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112220044
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112220044
Enzymes [BR:
otw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
112220044
Bacterial toxins [BR:
otw02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
112220044
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Enzymes
112220044
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Enzymes
112220044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
EGF
Motif
Other DBs
NCBI-GeneID:
112220044
NCBI-ProteinID:
XP_024237419
LinkDB
All DBs
Position
LG01:complement(13485756..13501654)
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AA seq
495 aa
AA seq
DB search
MLMVPVGSGQPHHAVPVACALTCSWLLLFFHAAFSQKPAKLPLVGRKPFIAAWNAPLDLC
TVKYNVHTNLEHLFHISGSPRAVHTGQNVTIFYANRLGLYPFYTDHSIPINGGLPQNCNM
NDHLLKAYRDINHFIPSEDFAGLAVIDWEYWRPQWNRNWHKKDIYRRKSRDLITQAYVNV
TSSQIEELASKRFEKSARAFMQKTVQLGTFLRPNGLWGFYLYPDCHNYNLYEHNYTGSCP
LLESLRNDELLWLWNSSTALFPSVAIRKSQTDSVSNLHFSQFRVLESLRIAGLTSHGYDL
PTFVYTRLGYRDEAMAFLTTKDLIHTIGESAALGAAGFVIWGDLNLTSSRHNCTKVKSFL
NQRLGQYITNVTRAAEVCSDFLCQSNGRCVRRNLHAPYYLHLSGDSYHIQPSGDGDFVVT
GWHSQHELQLLAERFRCHCYEGHTGEKCDSLNKVVEEEEEEEGGEGEEEQRESAASRTGN
TLGLVVLLLLLNLYP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggtgcccgtcggaagtggccaacctcaccacgccgtgcctgtggcctgcgcc
ctcacctgttcctggctcctgctattctttcatgccgccttcagccagaagcctgccaaa
ctgcccctggtgggccgcaagcccttcatcgctgcctggaacgcaccgctggacctgtgt
actgtcaagtacaatgtccacaccaacctggagcacctcttccacattagtggcagtccg
cgggccgtccacactggccagaacgttaccattttctatgccaaccggctgggcctctac
cctttctacacggaccacagcatccctatcaatggaggcctgccccaaaactgcaacatg
aatgaccatctcctcaaggcctacagggatatcaaccattttatcccctctgaggacttt
gccggtctggcggtcattgactgggagtactggcgcccacagtggaaccgcaactggcac
aagaaagacatttaccggcggaagtcccgggatctgatcacacaggcctatgttaacgtg
acttcatcacaaatcgaagagctggcgagcaaacgctttgagaagagtgcccgggcattc
atgcagaagactgtccagctagggacgttccttcgccccaacggactctggggcttctac
ctctatccggactgccacaactacaacctgtatgagcacaactacacagggtcctgccct
ctgctggagagcctgcgtaatgacgaactgctctggttgtggaacagcagcacagcactg
tttccctcagtggctatcaggaagagccaaacagacagtgtcagcaacctccatttctcc
cagtttagggtgctggaatctctgaggatagctgggctcacctcacacggctatgatctg
cccacattcgtgtacacgcgcctgggctacagagacgaggcaatggccttcctcaccacg
aaagacttgatccacaccattggggagagtgctgctcttggtgcggctggttttgtgatc
tggggagacctcaacctcacctcatccagacacaactgcacaaaggtgaagtccttcctg
aaccagcgcctgggtcagtacatcaccaatgtgacacgggctgcagaggtctgcagtgac
ttcctgtgccagagcaacggccgctgtgtccgcaggaacctccacgccccgtactacctc
cacctgagcggagacagctaccacatccagccctcaggagacggggactttgtggtcact
ggctggcactcgcagcacgagctccaactactggccgagaggttccgctgtcactgctat
gagggacacaccggggagaagtgtgacagcctgaacaaggtggtggaagaagaggaggaa
gaggaggggggagagggggaggaggagcagagggaaagtgcggcttcacgaactgggaac
acccttggcttggtggtgttgctcctcctattgaacttatatccttag
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