Oncorhynchus tshawytscha (Chinook salmon): 112226655
Help
Entry
112226655 CDS
T05605
Name
(RefSeq) glutamate decarboxylase 1-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00250
Alanine, aspartate and glutamate metabolism
otw00410
beta-Alanine metabolism
otw00430
Taurine and hypotaurine metabolism
otw00650
Butanoate metabolism
otw01100
Metabolic pathways
Module
otw_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
112226655
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
112226655
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
112226655
00430 Taurine and hypotaurine metabolism
112226655
Enzymes [BR:
otw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
112226655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
DTX3L_a-b
Motif
Other DBs
NCBI-GeneID:
112226655
NCBI-ProteinID:
XP_042163943
LinkDB
All DBs
Position
LG28:9542191..9566673
Genome browser
AA seq
588 aa
AA seq
DB search
MATSEPTAAGGDQDPNSANLRPSSTNYDAWMQGCTRKLGMKICGFLQKNNSLGEEGRLAG
SLSERQKNLFSCVNSDRDARFCRTETDFSNMFARDLLPAKNGEEATMQFLLELVDILTNY
VRKSFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRF
FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPSGEGDGI
FSPGGAISNMYSVMIARYKYFPEVKTKGMSAAPRLVLFTSEHSHYSIKKAGAALGFGSEN
VVLLSTDERGRVIPADLEAKILDVKQKGYHPLFVNATAGSTVYGAFDPINEIADICEKYN
MWLHVDGAWGGGLLMSRKHRHKFSGVERANSVTWNPHKMMGVPLQCSAILVREKGILAGC
NSMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLS
QYLYDKIRNREGYEMVFDGVPQHTNVCFWYIPPSLRGMEHNSKEYREKLHKVAPNIKAMM
MESGTTMVGYQPQGQKVNFFRMVISNPAALQSDIDFLIDEIERLGRDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctgaaccgacagccgctggcggggaccaggaccccaactccgccaattta
cgaccttcatccacaaactatgacgcgtggatgcaaggatgcacgcggaaactggggatg
aagatctgtgggttcctgcagaagaataacagtctaggggaggaaggccggctcgcaggc
tcgctctcagaacgccagaagaacctgttctcctgtgtcaacagcgaccgggatgcgcgc
ttctgccgcactgagaccgatttctccaacatgtttgcgagagatttacttcccgccaaa
aatggagaagaggccactatgcagttcttattggaacttgtggacatcctcaccaactac
gtcaggaagtcgtttgaccgttccaccaaggttctggacttccaccatccgcatcagctg
cttgagggcatggagggcttcaacctcgagctctctgaccagccagagtcccttgagcag
atccttgtggactgcagggacacgctcaagtacggcgtgcgaacaggtcatccgcggttc
ttcaaccaactctctactgggctggacatcattgggctggctggggagtggctcacctct
acagccaacacaaacatgttcacctatgagatcgctccagtgtttgtcctgatggagcag
ctgacgctgaagaagatgagagagattattggctggccctcaggagagggggacggaata
ttctcaccagggggtgccatctctaacatgtacagtgtgatgatcgctcgctacaagtac
ttccctgaggtcaagaccaagggcatgtctgccgctccccgtctggtgcttttcacatca
gaacatagccactactctatcaagaaggcaggggcagctctgggctttggctcagagaac
gtggtcctgctgagcacagatgagagggggagagttattcctgctgatctagaagctaag
atcctcgatgtcaagcagaagggttatcatccactgtttgtgaacgctacagctggttcc
actgtttacggagcatttgaccccatcaatgagatcgctgacatctgcgagaaatacaac
atgtggttgcacgtagatggtgcatggggaggtggtctcctgatgtccaggaagcatcgc
cataagttcagcggtgttgagagggctaactctgtcacgtggaatcctcacaagatgatg
ggagtgcctctacagtgctccgccatcctggtcagagagaagggtattctggcgggctgt
aactcgatgtgcgcagggtacctgttccagcctgataaacagtatgatgtcagctatgac
acgggtgacaaagccattcagtgtgggcgccacgttgacatctttaagttctggctcatg
tggaaggccaagggcaccataggatttgagcagcacattgacaagtgtctggacctgtct
cagtacctctacgacaagatcagaaacagagagggatacgagatggtgttcgatggagtg
ccccagcacaccaatgtatgtttctggtacattccacccagcctgagaggcatggaacac
aacagcaaagagtatcgagagaaacttcacaaggtggcgcccaatatcaaagcaatgatg
atggagtctggtacgaccatggtgggctaccagcctcagggccagaaggtcaacttcttc
cgcatggtcatctccaaccctgcagccctccagtcagacatcgacttccttattgacgag
atcgagaggctggggcgtgacctgtag
DBGET
integrated database retrieval system
