Oncorhynchus tshawytscha (Chinook salmon): 112228872
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Entry
112228872 CDS
T05605
Name
(RefSeq) sialidase-3
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00511
Other glycan degradation
otw00600
Sphingolipid metabolism
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112228872
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112228872
Enzymes [BR:
otw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
112228872
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Gene cluster
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Motif
Pfam:
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-GeneID:
112228872
NCBI-ProteinID:
XP_024250353
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Position
LG30:complement(7394635..7397260)
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AA seq
408 aa
AA seq
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MGNTSSRSYFPGIKMQPAKTTLFKREQTGTTYRIPALIYLKESQTFLAFAEKRSSPSDID
AKLIVMRRGTQQNGSTQWSESQELLSACLPHHRTMNPCPVYEKNTKTLFLFFICVLGNTP
EHHQICTGNNKAHLCYITSNDEGQSWSQTKDLTESLIGKTVRRWATFAVGPGHGIQMESG
RLIIPTYAYYIHCKCFSFPFPFTVQPHALSIYSDDFGQTWQRGRMLQRKSCECEMAEIID
HEGSSHLYCNARHRGHRVEALSESSGVYFDKPSLAPRLVEPCHGGCQGSVVGFPAPEQGE
EGMGGTTSPPLASDTQTWLLFTHPTNKRTRKDLGVYLNRSPLHTSGWDRPWIIHSGPSGY
SDLAYIEDTEHFACLMECGENSELEQIAFVSFPLSDVMQTVDEKGNNF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggggaatacctcatcaaggagttatttcccgggaatcaaaatgcaacctgctaaaacg
actctgttcaaacgggagcaaactgggacgacatacagaataccagctctcatctaccta
aaagagagtcagacattccttgcctttgcagagaagcgttcttcccccagtgacattgat
gcaaaacttattgttatgaggagaggcactcaacaaaatggatccactcagtggtcagaa
tcccaggagctattatcagcatgtttaccacaccaccgcaccatgaacccctgcccggtg
tatgagaagaataccaagactctattcctatttttcatctgcgttttgggtaacactcca
gagcaccatcagatctgtacaggcaataataaggcacacctgtgttacatcaccagtaat
gatgagggccagagctggagccagacaaaggacttgacagagagtctgataggcaaaacg
gtcagaaggtgggctacatttgctgtgggaccaggccatggcattcaaatggagagtgga
agattgatcattcctacctatgcctattatatccactgcaaatgcttctccttccccttc
cccttcacggtacaaccacatgctctctcaatatacagtgacgacttcggtcagacatgg
caaaggggcaggatgcttcaaagaaagtcctgtgaatgtgagatggcagagatcatagac
cacgagggcagcagtcacctgtactgcaacgcccgccatagaggtcacagagtggaagct
ttgagtgagagcagtggggtttactttgacaagcccagcttggctccaaggttagtggag
ccgtgccacggtggttgccaaggcagtgtggttggcttccctgcccctgagcaaggtgaa
gagggcatgggtggtaccacatcaccaccactggcctcagacacgcaaacctggctactc
ttcacccacccgaccaataagaggacgaggaaagacttgggagtgtatttgaaccgttcc
ccactgcacacgtcaggttgggaccggccctggatcatccacagtggacccagtggctac
tcagacctggcctacattgaggacacggagcactttgcttgcctgatggaatgtggcgag
aatagtgagcttgaacagattgcctttgtgtcttttcccctcagtgatgtcatgcagacc
gttgacgagaaaggaaataacttctag
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