KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112229426
Entry
112229426         CDS       T05605                                 
Symbol
polr1f
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112229426 (polr1f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112229426 (polr1f)
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     112229426 (polr1f)
SSDB
Motif
Pfam: RPA43_OB SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 112229426
NCBI-ProteinID: XP_042166177
LinkDB
Position
LG31:complement(30076038..30083473)
AA seq 366 aa
MANLEQTEDDPKHAKMSTEVSVLTNPTANGPSAAGGGDPGAFPSLIPSFASACKLVSTPY
SCLVMDTHRRHIALSPMYLKKKRTGIQEELNTELLRYSESLKGVPLAYDEVSLLGQHGDI
YDDNGYIHLDIQANFVVFQPQRGQKLLGTVNKLGVSHVGCLVHGCFNASVPKPAHVTMET
WREAGPRIGAELEFEVCQLDTDIVGVLLIKGRLGRTRVQELMAAGESSDPTDPAEQLEEP
DAEPALEPNQDWPDATVKPKKTKKEKHREEVASVPAPGAVVSGTAEDSSTNGHSETRKKK
KRKEKRQNEEDEEKEVGGEGPVEVQGSDSSGYLSDKPNRKRKQGDDITSCLHGDPETPKT
KKKKNK
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcgaacttggagcagacagaagacgacccaaaacacgcaaaaatgtccaccgaagtc
tcagttttaaccaatccgacagcaaacggaccttctgcggcaggcggtggagacccaggc
gcgttcccaagtctgatcccgtcgttcgctagcgcatgcaagttggtgtcaacgccgtac
tcgtgtctggtcatggacacgcacagaagacacattgccctgtcgcccatgtacctgaag
aagaaacggacagggatccaagaggaactgaacaccgaactgctaagatactcagaaagt
ctgaaaggtgtgcctctggcctatgatgaggtcagtttgctggggcagcatggagacatc
tacgatgataacggatacattcacctcgacatacaagcaaactttgtcgtcttccaaccc
cagagaggacagaaactactgggtacagttaataagcttggtgtgagtcacgtgggctgt
ctggtccatggctgtttcaacgccagcgttccgaagccagcccacgtcaccatggagacc
tggagggaggcaggacccagaataggggcggagctggagtttgaggtctgtcagctagac
acagacatagtcggagtactgctgatcaaaggaagacttggcaggacacgggttcaggag
ctgatggcagctggagagagttctgatcctactgaccccgcggaacagctagaggaacca
gacgcagaacctgctctagaacccaaccaggactggcccgacgccaccgtcaaacccaag
aagacgaaaaaggagaaacacagagaggaggtggcttcagtaccagcccccggagccgtt
gtcagcggaacagcggaggacagcagcactaacggccacagtgagacgaggaagaagaag
aagaggaaggagaaacgacagaacgaagaagatgaggagaaagaagtggggggggagggt
cctgtggaggtgcaggggagcgactccagtggttaccttagtgacaagccaaacaggaag
aggaaacagggtgacgacatcacgtcctgtctccatggagatcctgaaacgcccaaaact
aagaagaagaaaaataaatga

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