Oncorhynchus tshawytscha (Chinook salmon): 112230216
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Entry
112230216 CDS
T05605
Name
(RefSeq) prostaglandin E2 receptor EP1 subtype
KO
K04258
prostaglandin E receptor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112230216
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112230216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112230216
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Lipid
Prostaglandin
112230216
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Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Serpentine_r_xa
HXXEE
DUF6077
Motif
Other DBs
NCBI-GeneID:
112230216
NCBI-ProteinID:
XP_024252173
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Position
LG02:72477789..72484662
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AA seq
395 aa
AA seq
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MLAMNHYNLSGPPGALDPLSNLSQWDTEMVEMESLAHQGNLTSDRPMSGGPIAAALSMTL
GVISNIVALFILANAYSHQRRRSKATFLLFASSLVLTDFFGHIIPGVLVLRLYLSGGVFP
EAVAASSNGSTDPMCQFLGGSMVFFGLCPLFLGCAMAAERCLGVTQPLLHSSLVTTTRTK
LSLSGIWLVALCVALLPCFQLGSYTYQHPNSWCFIKVLANDTQEADVAFVTLFSGLGLTS
LGVALVCNTISGLTLVLARLRRRPSGYSSSHSHRSVAKSHDIEMVVQLVGIMVTSCICWS
PLLIFGLMSVMRSYRGSIDKADMATYETLNLMGVRLASWNQILDPWVYILLRRAVLRKIY
LITKCQADLNGSVLRRWEGNSFQSKSSENSPVNRI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctagccatgaatcactacaacctctccgggcccccgggggccctcgaccccctctcc
aacctcagccagtgggacacggagatggtggaaatggagagtctggctcaccaggggaac
ctcacctcggacaggcccatgtccggaggcccgatcgcagccgctctctccatgaccctg
ggcgtcatctccaacatcgtggccttgttcatcctggccaacgcctactctcaccagcgc
cgacgctccaaagccaccttcctcctcttcgccagctccctggtactcacagactttttt
gggcacatcatcccgggagtgctggtcctccggctttacctctccggaggggtattcccc
gaggcggtcgccgcttcctcaaacggctcgaccgaccccatgtgccagttcctgggtgga
tctatggtgttcttcggtctgtgcccgctgttcctgggctgtgcgatggccgccgagcgc
tgtctgggtgttacgcagccactgctccactcctccttagttaccaccacccgtaccaag
ctgtccctctctggtatctggctggtggccctctgcgtggccctgctgccctgtttccag
ctgggttcatacacctaccagcaccccaacagctggtgttttatcaaggtcttagctaac
gacacccaggaagcggacgtagcctttgttacgctcttctccgggctgggcctgacgtcg
ctgggggtggccctggtgtgtaacaccatcagcgggctgaccctggttctggccaggctg
agacggaggccatcgggctactcatcgtcccacagccaccgctcagtggccaagagccat
gatatagagatggtggtgcagctggtgggcatcatggtcacgtcctgtatctgctggagc
cctctgctgatcttcgggctcatgtcggtgatgcgctcctataggggctccattgataaa
gctgacatggccacctacgagacgttgaatttgatgggtgtgaggctggcttcctggaac
cagatcctggacccctgggtctatatactgctgcgtcgggccgtcctccgcaagatctac
ctcatcaccaagtgccaggccgatttgaatgggagtgtgctccgacggtgggaggggaac
tcgtttcagagcaagagctcggagaacagtcccgttaacaggatatga
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