KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112231086
Entry
112231086         CDS       T05605                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 3
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00510  N-Glycan biosynthesis
otw00513  Various types of N-glycan biosynthesis
otw00514  Other types of O-glycan biosynthesis
otw00515  Mannose type O-glycan biosynthesis
otw00533  Glycosaminoglycan biosynthesis - keratan sulfate
otw00601  Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100  Metabolic pathways
Module
otw_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
otw_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    112231086
   00513 Various types of N-glycan biosynthesis
    112231086
   00515 Mannose type O-glycan biosynthesis
    112231086
   00514 Other types of O-glycan biosynthesis
    112231086
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    112231086
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    112231086
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:otw01003]
    112231086
Enzymes [BR:otw01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     112231086
    2.4.1.90  N-acetyllactosamine synthase
     112231086
Glycosyltransferases [BR:otw01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   112231086
  Glycolipid
   112231086
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 112231086
NCBI-ProteinID: XP_024253393
LinkDB
Position
LG03:21681908..21691241
AA seq 399 aa
MATWLQSKWRYLFMFLGVQLVVMALLSREGYHKRVSYFIRIFRKLETTATGTSGAGSPHA
RNHTGSDVYANLSLLAKAHGRGEDMPYCPKTSPLIGGPIHVSFPSGLTLAQVARKNPLVV
LGGRYRPPDCEARHRTAIIIPHRNREHHLKFLLYYLHPFLQRQQLNYGIYIIHQAGNYTF
NRAKLMNVGFREAMREEDWDCLFFHDVDLIPEDDRNTYMCDANPKHAAIAMDKFGYKLPY
KMYFGGVSALSPLHYLKMNGFPNNYWGWGGEDDDIGVRVSLGGMFISRPSVKVGRYKMIK
HKLDKGNDVNPRRFNMLAKTRQTWKLDGMNTVEYEVLSRDHFPLYTNITVHIGTEAGLHA
MAPSPKILAKAPEKPPVETPTKPPAKLQQEQQQNQPTNH
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcgacgtggctacagtcaaaatggcgctacctgttcatgttcctgggtgtccagctg
gtcgtcatggcactgctgtcccgtgagggctaccacaagcgagtgtcgtatttcatcagg
attttccgcaagctggagactactgcgacggggacgtccggtgccggctcgccccacgca
cgcaatcatacgggcagtgacgtctatgccaacttgtccctcctggccaaggcccacggc
cggggcgaggacatgccctactgccccaagacgtctcccttgataggtggaccgatccac
gtcagctttccttccgggttgacactggcccaagttgcgcggaagaatccattggtggtc
ctcggggggcgctacaggccgcctgactgtgaggcgcggcaccgcactgccataatcatt
ccccacagaaaccgggagcaccacctgaagttcctcctctactaccttcacccatttcta
cagcgacagcagctcaactacggcatctacatcatccaccaggctggtaactacacgttt
aaccgggccaagctgatgaacgttgggttccgggaggccatgcgggaggaggactgggac
tgcctgttcttccatgatgtggacctcatccctgaggatgaccgcaacacctacatgtgc
gacgccaacccgaagcacgccgccatcgccatggacaagtttggatacaagctgccttac
aagatgtatttcggaggggtgtccgcgttgtctccactgcactacctgaagatgaacggc
ttccccaacaactactggggctggggaggagaggacgatgacattggagtcagagtatcc
ctaggagggatgttcatctctcgtccatcggtgaaggtgggccgatacaagatgatcaaa
cacaagctggacaagggaaacgatgtgaaccccaggaggttcaacatgctggccaagaca
cgtcagacgtggaagctggacggcatgaacactgtggagtacgaggtgctgtcacgtgac
cacttccccctctacaccaacatcactgtgcacatcggcaccgaggccggcctgcatgcc
atggcgccgtcccccaagatccttgccaaagccccagaaaagccgccagtcgaaaccccc
accaaacctccagccaagctccaacaggaacaacaacagaaccaacccacgaaccactga

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