Oncorhynchus tshawytscha (Chinook salmon): 112231086
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Entry
112231086 CDS
T05605
Name
(RefSeq) beta-1,4-galactosyltransferase 3
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00510
N-Glycan biosynthesis
otw00513
Various types of N-glycan biosynthesis
otw00514
Other types of O-glycan biosynthesis
otw00515
Mannose type O-glycan biosynthesis
otw00533
Glycosaminoglycan biosynthesis - keratan sulfate
otw00601
Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100
Metabolic pathways
Module
otw_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
otw_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
112231086
00513 Various types of N-glycan biosynthesis
112231086
00515 Mannose type O-glycan biosynthesis
112231086
00514 Other types of O-glycan biosynthesis
112231086
00533 Glycosaminoglycan biosynthesis - keratan sulfate
112231086
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
112231086
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112231086
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
112231086
2.4.1.90 N-acetyllactosamine synthase
112231086
Glycosyltransferases [BR:
otw01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
112231086
Glycolipid
112231086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
112231086
NCBI-ProteinID:
XP_024253393
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All DBs
Position
LG03:21681908..21691241
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AA seq
399 aa
AA seq
DB search
MATWLQSKWRYLFMFLGVQLVVMALLSREGYHKRVSYFIRIFRKLETTATGTSGAGSPHA
RNHTGSDVYANLSLLAKAHGRGEDMPYCPKTSPLIGGPIHVSFPSGLTLAQVARKNPLVV
LGGRYRPPDCEARHRTAIIIPHRNREHHLKFLLYYLHPFLQRQQLNYGIYIIHQAGNYTF
NRAKLMNVGFREAMREEDWDCLFFHDVDLIPEDDRNTYMCDANPKHAAIAMDKFGYKLPY
KMYFGGVSALSPLHYLKMNGFPNNYWGWGGEDDDIGVRVSLGGMFISRPSVKVGRYKMIK
HKLDKGNDVNPRRFNMLAKTRQTWKLDGMNTVEYEVLSRDHFPLYTNITVHIGTEAGLHA
MAPSPKILAKAPEKPPVETPTKPPAKLQQEQQQNQPTNH
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtggctacagtcaaaatggcgctacctgttcatgttcctgggtgtccagctg
gtcgtcatggcactgctgtcccgtgagggctaccacaagcgagtgtcgtatttcatcagg
attttccgcaagctggagactactgcgacggggacgtccggtgccggctcgccccacgca
cgcaatcatacgggcagtgacgtctatgccaacttgtccctcctggccaaggcccacggc
cggggcgaggacatgccctactgccccaagacgtctcccttgataggtggaccgatccac
gtcagctttccttccgggttgacactggcccaagttgcgcggaagaatccattggtggtc
ctcggggggcgctacaggccgcctgactgtgaggcgcggcaccgcactgccataatcatt
ccccacagaaaccgggagcaccacctgaagttcctcctctactaccttcacccatttcta
cagcgacagcagctcaactacggcatctacatcatccaccaggctggtaactacacgttt
aaccgggccaagctgatgaacgttgggttccgggaggccatgcgggaggaggactgggac
tgcctgttcttccatgatgtggacctcatccctgaggatgaccgcaacacctacatgtgc
gacgccaacccgaagcacgccgccatcgccatggacaagtttggatacaagctgccttac
aagatgtatttcggaggggtgtccgcgttgtctccactgcactacctgaagatgaacggc
ttccccaacaactactggggctggggaggagaggacgatgacattggagtcagagtatcc
ctaggagggatgttcatctctcgtccatcggtgaaggtgggccgatacaagatgatcaaa
cacaagctggacaagggaaacgatgtgaaccccaggaggttcaacatgctggccaagaca
cgtcagacgtggaagctggacggcatgaacactgtggagtacgaggtgctgtcacgtgac
cacttccccctctacaccaacatcactgtgcacatcggcaccgaggccggcctgcatgcc
atggcgccgtcccccaagatccttgccaaagccccagaaaagccgccagtcgaaaccccc
accaaacctccagccaagctccaacaggaacaacaacagaaccaacccacgaaccactga
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