Oncorhynchus tshawytscha (Chinook salmon): 112231789
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Entry
112231789 CDS
T05605
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00052
Galactose metabolism
otw00511
Other glycan degradation
otw00531
Glycosaminoglycan degradation
otw00600
Sphingolipid metabolism
otw00604
Glycosphingolipid biosynthesis - ganglio series
otw01100
Metabolic pathways
otw04142
Lysosome
Module
otw_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
112231789 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
112231789 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112231789 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
112231789 (glb1)
00511 Other glycan degradation
112231789 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112231789 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112231789 (glb1)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
112231789 (glb1)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112231789 (glb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
112231789
NCBI-ProteinID:
XP_024254329
LinkDB
All DBs
Position
LG34:complement(6111703..6119840)
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AA seq
650 aa
AA seq
DB search
MACSRFGVVLLCSLFASTLGVPQTFSVDYKNDCFRKDGEEFRYISGSIHYNRIPRAYWKD
RLLKMYMAGLNAIQTYVPWNFHEPSPDRYNFSGDRDLEHFLQLAQDIGLLVVLRPGPYIC
GEWDMGGLPAWLLHKKDIVLRTSDPDYIAAVDKWMGTLLPMLKPFLYQNGGPIITVQVEN
EYGSYFACDYNYLRHLTSLFRSHLGNDVVLFTTDGAGAGYLKCGTLQGVYATVDFGPGGN
VSAAFDAQRQAEPHGPLVNSEFYTGWLDHWGEHHSTVSTAIVAKSLNEILAIGASVNLYM
FIGGTNFGYWNGANTPYAPQPTSYDYDAPLTEAGDLTDKYFAIQDVIKLYRKIPEGPVLP
STPKYAYGAVPMKKLHTVVDALDILSFSGPVKSIYPLTFIEMNQPFGFVLYQTKLPVDCS
KPTPLSSPLNGVHDRAYVSVDGVAAGILERDKALTINVTGKAGSQVDILVENMGRVNYGK
DINDFKGLVSNLTLGADILTGWEVYSLSIDQAVSQGLLWEMGSRVAGTPPPSPLSVPSFY
GGTFVIPDGIPDLPQDTYIQFPDWRKGQVWINGFNLGRYWPARGPQITLYVPASILSTAV
PNNVTVLELEGDPCTPGPCTVEFTNTPVLNATVTSDHKHQRALFHKEDLL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctcaaggtttggagttgtgctactgtgttccctctttgccagtacacttggt
gtgccgcagaccttcagtgtggactacaagaacgactgcttccgcaaggatggggaagag
ttccgctacatctccggtagcatccactacaacaggatccccagggcctactggaaagac
aggctactcaagatgtatatggccggactgaatgccattcagacgtacgtcccctggaat
ttccacgagccctccccggatcggtacaacttcagtggggacagggatctagaacacttc
ctgcagttggcccaagacattggtctgctggttgtactgaggcctgggccctacatctgt
ggagagtgggatatggggggtttgcctgcctggctgctccacaagaaagacattgtcctg
cgtacctcagacccagattacattgcggctgttgacaagtggatgggcacgctactgccg
atgttgaagccgttcctttatcagaacggcggcccaatcatcactgttcaggtggagaat
gagtacggcagctactttgcctgtgactacaactacctgcgtcacctgaccagtctgttc
cgctcccacctggggaacgacgtggtgctgttcaccacagacggggccggggctgggtac
ctcaagtgtggaactctgcagggcgtctacgccactgtggactttggcccaggtgggaat
gtgtctgctgcatttgatgcacagagacaggcagagccccatggacccttggtgaactct
gagttctacactggctggctggaccactggggagagcatcactctacagtgtccaccgcc
atcgtggccaagtccctcaacgagatcctcgccatcggcgccagcgttaatctatacatg
tttattggaggaaccaattttggatactggaatggtgccaataccccctatgccccccag
cctactagttatgactatgatgccccgctcactgaggcaggagacctcactgacaaatat
tttgccatccaggatgtcatcaaactgtatcggaagataccagagggacccgtgcttcca
tcaacacctaaatatgcctacggagctgtgccaatgaagaagctccacacagtagtcgat
gctctagatatactatccttctccggtcctgtcaaaagcatctacccgttgaccttcatt
gagatgaaccaaccgtttgggttcgtcctctatcagaccaagctgcctgtggactgcagt
aagcccacccctctgtcctcaccactgaatggagtccacgaccgggcatatgtatcagtc
gatggggttgctgctgggatcctagagagggacaaggccctgaccatcaacgtgactggg
aaggctgggagtcaggtggacatactggtggagaatatgggcagagtcaactatgggaag
gacatcaatgactttaagggcctggtgtctaacctgacattgggggccgacattctcacc
ggctgggaagtctacagcctcagcatcgaccaggctgttagccagggtcttctctgggag
atgggctccagggtagctggcaccccaccaccttctcccctctccgtcccctccttctat
gggggcacctttgtcatcccggacggcatcccagacctgccccaggacacctacatccag
ttccctgactggagaaagggccaggtgtggatcaacggtttcaacctgggccgctactgg
cccgctcgcggcccacaaatcaccttgtacgtgcctgctagcatcctgagcacggccgtg
cccaacaacgtgaccgtcctggagctggagggggatccatgcacccccgggccctgtacc
gtggaattcaccaacaccccggtcctgaatgccacggttacgtctgaccacaaacaccag
agggcgctgttccataaagaggatctcttatga
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