Oncorhynchus tshawytscha (Chinook salmon): 112235169
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Entry
112235169 CDS
T05605
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112235169
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112235169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
112235169
NCBI-ProteinID:
XP_042180022
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All DBs
Position
LG07:complement(10315307..10407345)
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AA seq
1020 aa
AA seq
DB search
MYAGRKRRKPVQRDIEVKDQKEKQTAPSEGTKSNPSKRHRDRLNSELDRLASLLPFPEEV
TSSLDKLSILRLSVSYLRTKNFFSVALKTQACKGLKANGGNHDSSETTGLVDGWMPEGEL
LLQALNGFVLVITADGVIFYSSHTIQDYLGFHQTDVMHQSVFDLIHTEDQQEFRRNLHWA
LNPPAVPQQVESPPDGKPVPSSSLVTYNPDQLPPENSSFLERNFVCRFRCLLDNSSGFLA
LTLQGRLKFLHGQNCRLDDGCNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT
PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK
DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLSKRSMHLPFTFATGEALLYQS
SYPIHGLTDSLQAKGKTKSKKGKLDKNPSKDNGGLDPSSLLGALMRQDESVYVCQPAVEP
KMSFHSSLFSEGKGQSCGYYSGGPLGGGVGESWSSVPNGVTTISTGLNGEPPSSFDPLLT
TLDSLSLEGDETCSNSELFSALENLGLNAEDLELLLLDERMIRVEMDPDYIPSLNDLLTN
NEILAYIHDSLENKTEEGQGGDSHVSIPQTSTTTHPPGPILNSALILNPHTQAAPTMHIS
TFHPQATDPPAPQPMLPPHRLPKQPPIVQLSQQMQQHLNLVKPVLAKYPWPPTQTDVPTP
SQPDTLQHTNSLTLVHNGHWLPQQQHMLAGLDDHCHSLHPLVNSKTSQLGPHGAGQLKQH
QNNIHLQSQWQQHNQHLQVQLQSPCHFKQQKASSSSSATLNGVHPDPDWHSSSYDDQLGL
TANGANGACTVSYPNGHADTLTHTTEGEVTHTDYGMGDLTTVGMVMNGVTVGGIGHYQGQ
GGVTANPSDHLVHHKQHSPQVPSTYFPQYSTTQNSLDYILGLSQPQHTMPTLDAYGIVNS
PASQDATHCKMENGCILNDTNVAYKGSCLLPNVNSQTTSDNLQPDALHTLPDPQTTGFYL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacggaaaagaagaaaaccggtgcaaagagacatcgaagtgaaagaccaa
aaagagaaacagacagctccatctgaagggaccaagtctaacccatcaaagcgccaccgg
gaccgtctgaactctgagttggaccgtctggccagtctactgcccttcccagaggaggtc
acctccagcttggataaactctctatcttacggctcagcgtgagctacctgaggaccaag
aacttcttctcagttgccctgaagacccaggcttgcaaggggttgaaggccaacggtggt
aaccatgacagcagcgagacaacgggattggtggacggctggatgcccgagggtgaactc
ctattgcaggcccttaatggtttcgtcctggtcatcactgcagacggggtcatattctac
tcctctcacaccattcaggattacctgggattccaccaaacggacgtgatgcaccagagt
gtgtttgatctgatccacactgaggaccagcaggagtttaggaggaacctgcactgggct
ctcaaccccccggccgtgccccagcaggtggagtcacccccagatggaaaaccagtcccc
agctcgtccctggtgacctataaccccgaccagctccctccagagaactcctccttcctg
gaaaggaacttcgtctgtcgcttccgctgtctcctcgacaactcttctggcttcctggcc
ctgaccctccaaggccgtctgaagttcctgcatggccagaactgccggctggatgacggc
tgtaacgtgcccccccagctggccctgtttgccatcgctacccccctccagcctccatcc
atcctggagatcaggaccaagaacatgatcttcaggaccaaacacaagctggacttcacc
cccatggcctgcgatgccaaggggaagatcgtgctgggctacaccgaggctgagctccgg
gttcgaggctctggataccagtttatccatgcagctgatatgctctactgtgctgagaac
cacgtccgcatgatcaagacaggggagagcgggctgacggtgttcagactgctcactaag
gacaaccgctggaggtgggtccaagccaacgccagactggtctacaagaacggcaagcct
gactacatcatcgccacccagaggcccctggtggaggaggagggaggagagcacctgagc
aagcgttccatgcacctccccttcaccttcgccacgggcgaggcccttctctaccagagt
agctaccccatccacggcctcaccgactcactccaggctaaaggcaagaccaaatccaag
aagggcaagctggacaagaacccgtcgaaggataacggtggactggaccccagctccctg
ctcggggcgctgatgaggcaggatgagtccgtgtacgtgtgccaaccagccgtcgagccc
aagatgtccttccacagtagtctgtttagtgaggggaaagggcagagctgtggatactat
agcggtggccctctgggtgggggtgtgggagagagctggagctctgtgcccaacggggtt
accaccatctccactggcctcaacggagagcctccgtccagcttcgacccgctgctcacc
accctggactcactgtctctggagggggacgagacatgctctaacagcgagctgttctct
gctctggagaacctgggtctgaacgcagaggatctggagctactgctgctggatgagagg
atgatcagagtggagatggatccggactacatcccctcgctcaacgacctgctcaccaac
aacgagatcctcgcctacatccacgactcgctggagaacaagaccgaggagggccagggt
ggggatagtcacgtgtccataccacaaacctcaaccacaacccatcccccaggccctatc
cttaattctgcccttatccttaaccctcatacccaagccgcccccactatgcatatctct
accttccacccccaagctactgaccctcctgcccctcaacccatgttaccccctcacaga
ctaccaaaacagccacccatagtgcagctctcccagcagatgcagcagcacctcaactta
gtaaagcccgttctggcaaaatacccctggcccccgacacaaacagacgtccccacgcca
agccagccagacaccctgcagcacacgaactcactaaccttggtccataatggtcactgg
cttccccagcagcagcatatgcttgcggggctggatgaccactgccacagccttcacccc
ctggttaacagtaagacatcccagctggggcctcacggggccgggcagctcaaacagcac
cagaacaacatccatcttcagagccagtggcagcagcacaaccagcacttacaggtccag
cttcaatctccgtgtcatttcaaacagcagaaggctagtagcagcagcagtgccactctc
aacggggtgcaccctgatcccgattggcatagttccagctacgacgaccagttgggactg
accgctaatggagctaatggagcctgcaccgtctcctaccccaacgggcacgcggacacc
ctcacacacactacagaaggagaggtcactcacacggattacggtatgggtgatttgact
accgtgggcatggtcatgaacggggttacggtagggggcataggtcactaccagggacaa
ggaggggtgaccgctaacccctcagaccatctggtgcatcacaaacaacattctccacag
gtcccatctacctacttccctcagtactccaccacacagaactctttagattacatcctg
gggctgtcacagcctcagcacaccatgcctactctggatgcctacggcattgtgaatagc
cccgcttcccaggatgccactcactgcaagatggagaacggctgcatcctcaacgacacc
aacgtggcttacaaagggagctgtctactgcccaatgtgaacagccagacaaccagcgac
aatcttcagcccgacgccctacataccctgccagacccacagactactggcttctacctc
tga
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