Oncorhynchus tshawytscha (Chinook salmon): 112236466
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Entry
112236466 CDS
T05605
Symbol
gad1a
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00250
Alanine, aspartate and glutamate metabolism
otw00410
beta-Alanine metabolism
otw00430
Taurine and hypotaurine metabolism
otw00650
Butanoate metabolism
otw01100
Metabolic pathways
Module
otw_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
112236466 (gad1a)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
112236466 (gad1a)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
112236466 (gad1a)
00430 Taurine and hypotaurine metabolism
112236466 (gad1a)
Enzymes [BR:
otw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
112236466 (gad1a)
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
112236466
NCBI-ProteinID:
XP_024260831
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All DBs
Position
LG03:43846159..43859469
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AA seq
586 aa
AA seq
DB search
MAASAPSSSGNEPDPNSTNLRPPGSSYDAWCGVAHGCSRKLGMKICGFLQKNNNLEEKIS
SFKERSSKDLLDNSDRDSRFRRTETDFSNLFARDLLPAKNGEEPTMQFLLEVVDILTNYV
RKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRFF
NQLSTGLDIIGLSGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPDGEGDGIF
SPGGAISNMYSVMIARYKFFPEVKTKGMTAAPRLVLFTSEHSHYSIKKASAALGFGTENL
ILLSTDERGRVIPADLEAKVIDAKARGCVPMFVNATAGSTVYGAFDPIHEIADICEKYNM
WLHVDGAWGGGLLMSRKHRHKLCGVERANSVTWNPHKMMGVPLQCSAILVRERGVLSGCN
SMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLSH
YLYTKIKGRKGYQMVFDGEPQHTNVCFWYLPPGIRDMPDGQEKREKLHKVAPKIKALMME
SGTTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLTDEIERLGQDL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcaccttcctcgtctggcaacgaaccggatcccaactcgacaaattta
cgaccaccaggctcaagctatgacgcttggtgtggagttgctcacggatgttctagaaaa
ttgggaatgaagatatgtggatttttgcagaagaacaacaacctcgaggagaagattagt
tccttcaaggaaagatcgtctaaggacctgctggataacagcgacagggattcccgtttc
agacgcaccgagacggacttttccaatctatttgctagagatttattaccagctaaaaat
ggagaggagccaactatgcagtttttgttggaggtggtggatattctcacaaactacgtc
cggaagactttcgacagatccaccaaggtcctggacttccaccacccccaccagctgctg
gaaggcatggagggcttcaacctggagctatctgaccaacctgaatctctggagcagatc
ctggtggactgtagggataccctgaaatatggagtgagaacaggtcaccccaggtttttc
aatcagctatctactggcttagacatcattggcttgtcaggagaatggctcacctccact
gcaaacactaacatgttcacctatgagattgccccagtcttcgtgctcatggaacagctg
acgctgaagaagatgagagagatcattggctggcctgatggagagggcgatgggatcttc
tcaccaggtggagcgatatccaacatgtacagtgtgatgatcgcccgctacaagttcttc
cctgaagtcaagaccaaaggcatgactgctgcccccagactggtgctcttcacctccgag
catagccactactctataaagaaagccagtgctgctctgggctttggaacagaaaacctg
atcctgttgagcacagatgagagagggagagtcattcccgctgatttggaagccaaggtc
atcgatgccaaggcgaggggttgtgtcccaatgttcgtgaacgctacagctggttccaca
gtgtatggagcattcgatcccatccacgagattgcagacatctgcgagaaatacaacatg
tggttacatgtggatggtgcgtggggaggaggcctactgatgtccaggaagcacaggcac
aagctgtgtggcgtagagagggccaactcggtcacctggaaccctcacaagatgatgggt
gtgccactgcagtgttctgccattctggtcagagagaggggagttttatcaggctgcaac
tccatgtgcgctggctacctcttccaaccagacaaacagtacgatgtatcgtacgacacg
ggggacaaggccatccagtgtggacgacatgtagatatcttcaaattctggctcatgtgg
aaagcgaagggaacaatagggtttgaacagcacatcgacaagtgtttggacctctcgcat
tatctctacactaaaataaagggtcgcaagggctatcagatggtgttcgatggagagccc
cagcacacgaatgtctgcttctggtaccttccaccaggcattcgtgacatgcccgatggt
caggagaagagggagaagttgcataaggtggcccccaagatcaaggcgttgatgatggag
tctggaactaccatggtgggctaccagcctcagggagacaaggtcaactttttcagaatg
gtcatctccaatcctgccgccaccaggtcagatatcgacttcttgactgatgagattgag
agactggggcaggacttgtaa
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