Oncorhynchus tshawytscha (Chinook salmon): 112237339
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Entry
112237339 CDS
T05605
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112237339
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112237339
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
112237339
NCBI-ProteinID:
XP_024261698
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All DBs
Position
LG03:complement(46249842..46300456)
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AA seq
1058 aa
AA seq
DB search
MLSNAGVYAVKKRKKPVQKTKKTPAPEVVKSNPSKRHRDRLNGELDRLTGLLPFPEDVCS
RLDKLSVLRLSVGYLKVKSFFKATMKKSSVLFPSGNGLNINGMEATTFSKGDLLLQALNG
FVLVVTAEGHVFYASPTIQDYLGFHQSDVVHQSVFELIHTDDRATFRRQLHFALNPKPFD
PEQGGDGMASSSDITRNIVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALNFQGR
LKFLHAQSMLGDDGTRSQPNLGLFTIATPVQNPSILEIRTKTIFFQTKHKLDFTPMGVDA
RGKVVLGYSEMELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQKTGCWVW
VQANARLVYKGGRPDFIIARQRALLNSEGEEHLHQRKMQLPFSFTTGEALLYETGPTLDA
TDFQTNSPKIRKVESLDPQSLLGSLLKQDESVYTQPQEPQLPIDQAFMDSRALTNVACNS
WQSNMEPQGPDGDDDGDGPSEVKQKGAVVAMIDALEKMARDGDLCEALQGLDVDAAELME
WESALLRLSQESNGTGGGDSSPELDDIMTNDIFSYVEEALFKESSEGSGNPPNCSIMVNN
NPNLNLFTEVFNNNNQDGPFTGMVSPTGVGQCKPGLLDSRSFIHNGSPVNSLNGQVTGNG
PDGLAGQNQAGPHQVFNSTQRLSHFGPQIPQMDLNIPTLQQLQLNDIFAPSLELPELSIP
HSSGQNGAVTFCTNMAGSCAQAPNNHMGSPQGITGRVHSNQPPPQFFTHNGLPATMAPNG
PQQISVPQSNHVAPSLVDGWASMIPSNAFVSPQIESSNLNLSNPLPTACLQGNSAPFQSL
KIQRVQQWPQNQQQLPPPASIIQNGIMANGHTFIPDCHSQDTETQRVPLTGLWPQNPNRL
YHQTQHGGLANGQPAPSSSCMFENISPPLPNGNSHVDGTRLAPTLSVCQSRMVDPQDQSP
PQGSCYFQWGPSEPVVGTSAVIQDSASTSPPSRPLVANITTPEGLLAMQQYLAGCSGVGQ
TQIPSLPVIDSNGIFSLPPLVNGSMCFTEHNQINYCNF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacgctggagtctatgctgtcaaaaagcggaagaagcctgttcagaaaacc
aagaaaacccctgctccagaagtggtcaagtcgaacccttccaaacgccaccgggatcgg
ctgaacggggagctggacaggctgacgggccttctaccattccctgaggatgtgtgctct
cgcctggacaaactctccgtgctccgcctcagcgttgggtacttgaaggtcaagagcttc
ttcaaagcgaccatgaagaaaagcagtgtcctgtttcccagtgggaatgggctgaacatt
aatgggatggaagccacaaccttctccaagggggacctactactccaggctctgaatggc
tttgtgctggtggtcacagctgaaggacatgtgttctatgcctctcctactatccaagac
tacctgggcttccatcagtcagacgtggttcaccagagtgtgtttgagctgatccacaca
gacgacagagccacgttcagacgacagcttcactttgccctcaaccccaagccctttgac
ccagagcagggaggagacggcatggcaagcagcagtgacatcaccaggaacattgtgaca
tataaccctgagcagctccccccagagaactcctccttcctggagaggaactttgtgtgt
cgcttccgctgcctcctggacaactcctctggcttcctggctctgaacttccaggggcgt
ctcaagttcctccatgcccagagcatgctgggggatgacgggacacgcagccagcccaac
ctgggcctgttcaccatcgccacccctgtccaaaacccgtccattttggagatcagaact
aagacaatcttcttccagaccaaacacaagctcgacttcacccccatgggtgttgatgcc
agggggaaggttgtcctgggctactcagagatggagttgtgtatgagaggctctggttat
cagttcatccatgcagctgatatgatgtactgcgcagacaaccatgtcagaatgattaag
acaggagagagtggtctgaccacattcagactgcttcagaagactgggtgctgggtctgg
gtccaggccaatgccaggctcgtctacaaaggtggaagacctgacttcatcatcgcacgc
cagagagctttgcttaattccgagggagaggagcatttacaccagaggaagatgcagctg
cccttcagcttcaccaccggggaggccctgctgtacgagaccggccccactctggatgcc
actgacttccaaaccaactccccaaaaatccgcaaggtggagtctctggacccccagtct
ctgctgggctccttactgaagcaagatgagtccgtctacacccagccccaggagcctcag
ctacccatagaccaggcattcatggacagccgagcgctcaccaatgtggcctgtaactcc
tggcagagtaacatggagccccaggggcccgacggggatgatgatggtgacggccccagt
gaggtgaagcagaagggggcggtggtggccatgatagacgccctggagaagatggcacga
gatggggacctgtgtgaggcgctgcaggggctggacgtggacgcggccgagctgatggag
tgggagagtgccctcctcaggctgagccaggaatccaacgggactgggggcggggattcc
tccccggagctggatgacatcatgaccaatgacatcttctcttacgtggaggaagccttg
ttcaaggagagcagtgagggtagcggtaacccccccaactgctccattatggtcaacaac
aaccctaacctaaacctgttcacagaggtgtttaacaacaacaaccaggatggaccattc
acaggaatggtcagccctacaggtgtaggacagtgcaagcccgggttgcttgacagccgc
agctttatccataatggctccccagtgaacagtctaaatggtcaggtaacaggcaatgga
ccagatggtttggcaggacagaaccaggcaggaccacaccaggtgttcaacagcacccag
aggctctcccactttggcccccagatccctcagatggacctgaacatccccaccctgcag
cagctacagctcaatgacatcttcgccccctctctggagctccccgagctcagtatccca
cacagctcaggccagaacggggctgttacgttttgcaccaacatggctggatcctgtgct
caggcaccaaacaaccacatgggaagccctcagggtatcactggccgggtccactctaac
cagccacctccacagtttttcactcataatggcttgccagctacaatggcaccaaacgga
ccacaacagatctctgttccgcagtccaaccatgtagcacctagtctggtggatggctgg
gcatccatgattcccagtaatgcctttgtttcaccccagattgaatctagcaatcttaat
ctatctaatccccttccgactgcttgccttcagggaaacagtgcaccatttcagtcactc
aaaatccagagagttcagcagtggccccagaaccagcagcagctgccacccccagccagc
ataatacagaatggaataatggcaaatggacacacattcatccctgactgtcacagtcaa
gacacagagacgcaaagagtccctctcacaggcctttggccacagaaccccaacagactg
taccaccaaactcagcatgggggattggccaatggccagcctgctccatccagtagctgc
atgtttgagaacatctcaccccccctacctaatggaaatagccacgtggatggcaccagg
ctggcccccacgttgtctgtatgccagagtaggatggtggacccccaggaccagagtcct
ccacagggctcttgctacttccagtggggccccagtgagccggtggtgggcacgtcagcc
gtcatccaggacagcgcaagcaccagccccccgtctcgcccgctggtggccaacataacc
acccctgagggcctactggccatgcagcagtacctggctggatgcagcggagtcggacag
acacagattccaagcctccctgtcatagacagcaatggaatattctctttaccacccctt
gtaaatggatccatgtgctttacagagcacaaccaaatcaactattgcaacttctaa
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