Oncorhynchus tshawytscha (Chinook salmon): 112239336
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Entry
112239336 CDS
T05605
Name
(RefSeq) progesterone receptor
KO
K08557
androgen receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
112239336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112239336
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112239336
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112239336
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
112239336
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Androgen_recep
Motif
Other DBs
NCBI-GeneID:
112239336
NCBI-ProteinID:
XP_024263582
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Position
LG08:complement(78288484..78316533)
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AA seq
695 aa
AA seq
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MQSATNISDTAKELCDAVSVSLGLSSQLNEIVDNGRSGPAFSADCGPNHGNHFSVSEESS
PEFGAGASMTSELTTQMQRKTRIKSNDLGPSFEVHQDICGQNYVGFLQTLERERDSAWKV
TRPMHELEMARGLRKNSDMFVNLDNAIALSVPSQFDELLPLSSPFRKDAPTQLFGREFTD
QSTVNGLIKSSLNKTEQGHEGPCPVAGGSWFCKYLDNGNCMSCGARKACPPGVNYQDYDP
GMPQEGHVQEQSYQSVMHESGLQQVYHSAIKKESSGWMSADSRLRCEDMLPVYFSDRRVC
KVCGDEASGCHYGAVTCGSCKVFFKRAAEGKQNHLCASRNDCTIDKLRRKNCPSCRLSRC
FRSGMSLKGRKLRGAGPLKGGVEGGTQAPGKERTGERGGERPGERGGERTGERTGGLQLS
TVSPQAKCCAASQAPALGPSPSLRPSLLNILSSIEPGMVNAGHDTSQPDCFASLLSSLNE
LGERQLVSVVNWAKAMPGFRQLHVEDQMSVIQSSWLGLMVFALGWRSYTNTDARELYFAP
DLIFNDQRMRVSSMYEHCVQFRLLSQRFCMLRVTQEEFLCMKALLLFSIIPVEGLRNQKC
FDELRISYIKELVCLASQHGEKHHTQRLFQLTQLLDFLHPIVRKLHQFTYDLFIQAQSLP
TRVSYPEMISEIVSVHVPKILTGIVQPILFHNAPC
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgccaccaatatatcagatacagccaaggagctatgtgacgcggtgtcagtg
tctttgggtttgagttcgcagttaaacgagatagtggataatggacggagcggccctgcc
ttctctgcagactgcggcccaaatcatggaaaccatttttcagtctccgaggagtcttct
ccagagtttggagctggcgcaagtatgacctcagagttaaccacccagatgcagaggaaa
acgagaattaaatcaaatgatctcgggccatcgttcgaagtacatcaagacatttgtgga
caaaattatgtcggttttttacagaccctcgagcgcgaaagggacagcgcatggaaggtg
acgaggcctatgcacgagttggaaatggcccgaggtctccgtaaaaactcggacatgttc
gtgaatttggataacgctattgcgctctcggtgccctctcagtttgacgaactgttacct
ttaagttctccattccgtaaagacgccccaacccagttatttggtagggaatttacggat
caatcgaccgtcaatggcctcatcaaaagcagccttaacaaaaccgaacaaggacacgag
ggaccctgtccggtggcgggtggatcttggttctgtaaatatttggacaacggaaattgc
atgtcttgtggagcacgtaaagcctgtccccctggggttaactatcaggactatgaccct
gggatgccacaagagggtcatgtccaggagcaaagttaccaaagtgtgatgcatgaaagc
ggtcttcaacaagtgtatcactccgctatcaagaaggagagttctggatggatgagtgct
gactccagactgagatgtgaggatatgttgccagtgtacttctctgaccggagggtgtgt
aaggtatgtggagacgaggcgtcaggctgtcactatggagctgttacctgtgggagctgc
aaggtgttcttcaagagggctgcagagggtaagcagaatcacctgtgcgccagccgtaac
gactgcaccatcgacaagctgaggaggaagaactgtccttcctgtcgtctcagcagatgc
ttccggtctggaatgagcctcaaaggccgcaagctgaggggagctggcccgctgaaagga
ggagtggaggggggaacacaggcacccggcaaagagaggactggagagaggggaggagag
aggcctggagagaggggaggagagaggactggagagaggactgggggattacagttatcc
accgtttccccacaggctaaatgctgtgctgcgtcgcaggctcccgctcttggcccctcc
cccagtctacgcccctccctcctcaacattttgagttccattgagccaggaatggtcaac
gcaggccatgacacctcccagccagactgtttcgcctccctactgtccagcctcaacgag
ctgggagagagacaactggtgtctgtggtgaactgggctaaagccatgccaggttttaga
cagctgcatgtagaagaccagatgtcagtgatccagtcttcatggctggggttgatggtg
ttcgctctgggctggaggtcttacactaacacagatgctagagagctctacttcgctcct
gacctcatctttaacgatcagaggatgcgtgtgtccagtatgtacgaacactgtgtccag
ttccgtctgctgtcccagaggttctgtatgctcagagtcacccaggaagagttcctctgt
atgaaggctctgctcctcttcagcatcatccctgtggagggtctgaggaatcagaagtgt
tttgacgagctgaggatctcttacatcaaggagctggtttgtctggccagccaacacgga
gaaaaacaccatacacaacgcctgttccagctaacacagctactggacttcctacacccg
attgtgaggaagctgcaccagttcacctatgatctgtttatccaggcccagtctctgccc
accagagtcagctatccagagatgatctctgagatcgtcagcgttcacgtgcccaagata
ctcacaggcatagttcagccaatcctctttcacaatgcaccttgctag
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