Oncorhynchus tshawytscha (Chinook salmon): 112242342
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Entry
112242342 CDS
T05605
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00900
Terpenoid backbone biosynthesis
otw01100
Metabolic pathways
Module
otw_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112242342
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
otw01006
]
112242342
Enzymes [BR:
otw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112242342
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112242342
Prenyltransferases [BR:
otw01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112242342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
112242342
NCBI-ProteinID:
XP_042161059
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All DBs
Position
LG23:complement(27726834..27730765)
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AA seq
364 aa
AA seq
DB search
MSKDKIIMGDSSCSNGTHHSGAVQSDPQLFEAQFEELVTELTEQDLTDSVLADALNRLRE
VLHYNTPGGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCIELLQAFFLVADDIMD
ASVTRRGQPCWYKRERVGLDAINDSFLLEGSIYRLLRRHCRAQPYYVHLLELFTETSFQT
ELGQALDLMTAPPGQIDLNRFTMERYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEEEHNN
AKHILLEMGEFFQIQDDYLDCYGDPAVTGKIGTDIQDNKCGWLVVTALGVMTPVQRAELE
SCYGRHDSVEKVKALYNTLQMPTLYHQYEDHSYQRLQKLIARHAQNLPHAVFLNFAKKIY
KRNK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacaagataatcatgggtgacagtagttgcagcaacgggacccaccactcg
ggggcggtgcagtcagacccacagctgtttgaggcccagtttgaggagctggtgaccgag
ctcacagagcaggacctcacagactctgtcctcgctgacgctctcaacagactccgagag
gtgttgcattacaacactcctggaggaaaaagaaacagaggtctgtctgtgattggctct
ttgagggagcttgttcctcccactgagctgacccaggatgctgtgcgacgggccctgctg
gttggctggtgcattgagctgctccaggcgttcttcttggtagctgatgacatcatggat
gcttcagtgactcggagaggtcagccctgctggtacaagagggagagagtgggtctggat
gccatcaatgattccttcctcctggagggatccatctacagactactgcgcagacactgc
agggcacagccctactacgtacacctattggagctcttcactgagacgtccttccagaca
gagctgggccaggcactggacctgatgaccgctcctcctggtcaaatagacctcaaccgc
ttcaccatggagagatataaggccatagtaaagtacaagactgccttctactccttctac
ctccctgtggcagcagccatgtacatggcgggcatcgacagtgaagaggaacacaacaac
gccaagcatatcttactggagatgggagagttcttccagatacaggatgactacctggat
tgctatggcgacccggcggtgacagggaagattggaacagacatccaggacaacaaatgc
ggctggctggtggtgaccgctctaggggtcatgaccccagtacaaagggcagagctggag
tcatgttatggtcggcatgacagtgtggagaaggtgaaagcactgtacaacaccctacag
atgcccaccctgtaccaccaatacgaagaccacagctatcagcgcttacagaaactcatc
gcgcgtcacgcccaaaaccttccacacgcagttttcctcaacttcgccaagaaaatctac
aagagaaacaagtga
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