Oncorhynchus tshawytscha (Chinook salmon): 112242984
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Entry
112242984 CDS
T05605
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112242984 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112242984 (setdb2)
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
112242984 (setdb2)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112242984 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
112242984 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
112242984
NCBI-ProteinID:
XP_042175333
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MITLLDSGLIVTPATTGPATTTAPATTTAPATGNESFVEVVIGAEILTVSVPDIDDPQTP
LPPQQTEPVSPPSPLRYNGSIIPLSPPYPNREDLMTPLLPLQLPYQFHTCSQACVPHLPP
SAHHFRGHNPLRIPLLCSFQRQWEGSENSEGAELDSEVTARGVVYKAPCGLSLCTPGEVL
CFLVATESHGILQVDDFTFDPLVQLECLRPPQWRPPGLAERDLSRGSEPTPVELCLQEEG
VRPEDFRYRKERWPHGCFLSSGPLFTTCCDCTDGCGDAESCACACLTPGGKHYSHQRLSE
HVPKGLYECGPWCGCDRGMCQNRVVQRGLRVRLQVFPTGNKGWGVRCRDDLDRGTFVCTY
AGVVLRAGLDSDEPLPPKRQKADLPSDDEVEVVDEWLAPAGEGRAPAETLEPSPPSSPPD
GLHVPVIQRPGVELSPQIQAVLVGNSLPVQPLTGMEVEEGVEQDNGVQKPQLNSQPHMKE
VDVKLSVSTSPKKLGPKQNPMEHLYYLDATKEGNVGRFINHSCDPNLFVQNVFTDSHDPN
FPVIAFFTSKVVKAGTELTWNYSHSPDSDLEQKVTCQCGCEGCQGLLA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgattaccttattggattccgggctgattgtgacaccggcaactacaggcccagctaca
actacagccccagctacaactacagcccctgccactgggaatgagtcttttgtagaggtg
gttattggtgcagaaatcctcacagtttcagtccctgacattgacgaccctcagactcca
ctgcccccccaacagacagagcccgtatcccctccctcacccctccgttacaatggctcc
atcatccccctgtcgcccccctaccccaacagagaggacctcatgactcccctgctgccc
ctccagctcccctaccagttccatacctgcagccaggcctgtgtgccccacctgcccccg
tccgcacaccacttccggggccacaaccctctcaggatcccattactctgctccttccag
cggcagtgggagggctctgagaattctgagggtgcagagttggactctgaggtcacggca
cggggtgttgtttacaaggctccctgtgggctgagtctctgcaccccaggggaggtgcta
tgttttctggttgccacagagagtcacggcattctgcaggtggacgacttcacctttgac
cccctggtgcagttggagtgtctgcggccaccgcagtggcgccctcccggtctggctgag
agggacctgagccgggggtcagagccaacgccggtggagttgtgcctgcaggaggaagga
gtgcggccggaggacttccgctacaggaaggagcgttggcctcacggctgtttcctcagt
tcgggcccgctgttcaccacctgctgtgactgcactgacggctgtggtgatgcggagagc
tgcgcctgcgcttgtctgaccccaggcggcaaacactactcccaccagaggctgtctgag
catgtgcccaaagggctgtacgaatgcggtccttggtgtgggtgtgaccgtggtatgtgc
cagaaccgtgtggttcagcggggtctgcgtgtccggctgcaggtcttccccaccggaaac
aaaggatggggggtgcgttgccgtgacgacctggacaggggcacgttcgtgtgcacatac
gcaggtgtagttctcagggcaggactggattccgacgagcccctcccacccaagcgccag
aaggcggaccttccctccgacgacgaggtggaggtggtagatgagtggctggcgccggca
ggggagggacgagcgcctgcagagaccctggagccctcgcccccctcctcacctcctgac
gggcttcatgtgcccgttatccagaggcccggggtggagctttctccacagatacaagcc
gtgttggtgggaaactccctgccagtccaacctctcacaggcatggaggttgaggagggt
gtggagcaagataatggggtacagaagccacagctgaattcccaaccacacatgaaagaa
gtggatgtgaagctgtctgtgtccacaagccccaaaaaacttggcccaaagcagaaccct
atggagcacctgtattacctagatgccacgaaggaggggaacgtgggaaggttcataaat
cacagctgcgaccccaacctatttgtgcagaacgtcttcacggactctcatgatccaaac
ttccccgtcatcgccttcttcaccagcaaagtggtgaaggcggggactgagttgacctgg
aactactcccacagccctgacagtgacctggaacagaaagtgacatgtcagtgtggctgt
gaaggctgtcagggactgctggcctga
DBGET
integrated database retrieval system
