Oncorhynchus tshawytscha (Chinook salmon): 112245641
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Entry
112245641 CDS
T05605
Name
(RefSeq) integrin alpha-L isoform X1
KO
K05718
integrin alpha L
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112245641
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112245641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112245641
04515 Cell adhesion molecules [BR:
otw04515
]
112245641
04090 CD molecules [BR:
otw04090
]
112245641
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112245641
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin alpha subunits
112245641
CD molecules [BR:
otw04090
]
Proteins
112245641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Copine
FG-GAP_2
Mid2
Motif
Other DBs
NCBI-GeneID:
112245641
NCBI-ProteinID:
XP_042166723
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All DBs
Position
LG32:9892221..9932619
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AA seq
1133 aa
AA seq
DB search
MSRQGPLCLLTCMAAMAVSSMAFNIDEANPKLYKGEEQDFFGYKVLQFISGKEKGVMVSA
PYQKNGSGGICRCAQDRTNCTDCYTPQETVTIKYIGLSMVAQSTSPPTFTACSPGLAHEC
DGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSASMTTEEFDENKGFIN
NIMTTLKNSSIKFAAVQFSSNTRTVFNFRDYQEGRALTKLWKEEHMADLTNTHKAIDFVL
KSIFENQAAGATADATKVLVIITDGNPSDTDKRFNSIERSDKKNIIRFVIGVKNVDLTKL
KSLASEPKENNTFLIQDYNELKGILDNFQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYV
NKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFT
GAPRSEHMGRILLFNKVNNNWTVAQSLPGEQMGSYFGAELSSVDIDSDGNTDFLLVGAPM
FHQPPREGRIYVYTLTDKLELRMEMNVSVPSQGRFGSSICSLTDLNGDGLKDVAVGAPLE
DDHRGAVYIYLGEKLKGIRPEFSQRISAVMMRSKLQFFGQTIDGKMDLGEDGLTDIVVGA
RGAVVVLRSRPVLSVSAHLHFHPAEISTDNFDCLAKEIISPMVTLTACFNMAEATKSKAE
VLSAGMNVSYLLDVDPVRQRSRAFYSDTNKGARRLLSTVELRKERTCFNHSVYMTQCVID
TLSPIIIQLVFSQSESQQEGLTAILNTDSPTQAVVEVPFEKNCKENDTCVAELEVDFNFI
TSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSIMHLLKSTRRTVFSCGGLE
GEIDRTTCSVSIPVYRSKTTAVFTSKFHILNTYDWNDTMEMTVIGLSDNGNSTNSSLTRT
IPVQFAVDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFKSVPITVTFTFPTKL
EHKFEMKDFQISVLQNHTQCGKIINSTTEYCSPEKYCKSIECESFLLEKFLTVTFVLSGN
VSFKDLDQHARNLSLPKKFTGDRETVHFISFVKLSYDKKRYVQTASDPRDNSSSFHQTQI
DVQAELIIPPHRNLIIGTGVGVGLFLLIIITMAMYMMGCFQRKSLENEENEGE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcaaggacccctctgcctgctcacctgcatggcagccatggctgtctcttca
atggctttcaacatcgatgaagcaaacccaaaactctacaaaggggaggaacaggatttc
tttggatacaaagtcctgcaattcatatctggcaaggagaaaggggtaatggtcagtgcg
ccatatcagaagaatggatctggtggaatctgtagatgtgctcaagaccgaacaaactgt
acagactgttacactcctcaagaaactgtcacaatcaagtacattggattgtctatggtt
gcacaatctacttctcctccaaccttcactgcctgcagccctggcctggcacacgagtgt
gatgggaactcctatctgaatagtatctgttatcagttcaacagccagcttcagatcacc
tcgaactttacacctgccttccaagaatgtactaagaaaatagtggacctcgttttcctc
tttgacggatcagcaagcatgacaacggaagaatttgatgagaacaaaggtttcataaac
aatatcatgacaaccctaaaaaactcctcaattaagttcgcagcggttcagttctcatca
aacaccaggacagttttcaacttcagagactaccaagaggggagagccttgactaaactt
tggaaagaggagcacatggctgatctaaccaacacacataaggcaatagactttgtcttg
aaaagcatttttgaaaaccaagctgccggcgccaccgcagatgcaactaaagtactggtc
ataataacagatggaaatcccagcgatactgacaaaaggttcaactctatcgaaagaagt
gataagaaaaacatcatccgctttgtcatcggggtcaagaacgttgatttgacgaaactc
aagtccctggcatcagagccaaaagagaacaacactttcctcatccaggactacaacgaa
ctaaaaggaatcctagacaactttcaaaaaaagatcttcaacattgaaggttccaagact
gctctggctggaaacttgactaaagaaatgtctcagagtgggttcagtgctgtctacgtt
aacaaggacaccttggttctgggctcagtgggatcaaacaactggcgtggatctctcttt
gagactgagggtctgagatcagaggaaagggaaattcaggaccccacattggacaaagat
tcctatatgggatactctgtagctgttgggaagaagaatgagaaccttctatactttacc
ggagcaccaagatctgaacacatgggacggatcctactttttaacaaggttaacaacaac
tggactgtggcacaaagcttgcctggagaacagatgggctcctacttcggtgcagagctg
agttctgtggacatagactcagacggcaacacagacttcctcctggtcggtgcaccaatg
tttcaccaacctccgagagagggcaggatctacgtctacacactgactgataagctggaa
ctgaggatggagatgaatgtttcagtgccatctcagggtagattcggctcctccatctgc
tctctcacagacctgaatggagatgggctgaaggatgtagctgtgggcgctccacttgag
gacgatcacaggggggccgtgtacatctacctgggtgaaaagctaaaggggatccgccct
gaattcagccagcgcatctcagctgtgatgatgagatctaagctccagttctttggccag
acgattgatgggaagatggacctgggtgaggatggactgactgatatcgtagtaggagcg
cgtggtgcagttgttgtcttgaggtccagaccggtcctcagcgtctctgctcatctccac
ttccatcccgcagagatcagcactgataactttgactgtctggcaaaagagatcatttcc
cccatggtgactttaacagcctgctttaacatggcagaggcaacaaagagtaaagctgag
gtgctgagtgcagggatgaacgtctcctacctgctggatgtggatccagtgagacagagg
agccgagccttttacagtgacacgaacaaaggggccagaagacttctctccacagtggag
ctgagaaaggagcggacttgcttcaaccactcagtctacatgacacaatgcgtgatcgac
acattatcgcccataatcatccaactagttttttctcaatctgaaagccaacaagagggt
cttactgccattctgaacactgacagtcctacacaggctgtggtcgaggtgccctttgaa
aagaactgcaaagaaaatgatacctgtgtggcagagcttgaggtggacttcaactttatc
acatcaactttattagtggtggaccagagttacttcaacgtgactataagactgtccaat
cacggggatgactcatacaacaccagtctaactctcctctaccctcctggcctctcattt
tccattatgcatcttctgaagtctacaaggagaaccgtgttcagctgtggtggtctggaa
ggtgaaattgacagaactacatgcagtgtcagcatacctgtctaccgtagtaaaaccaca
gcagtgttcaccagtaaattccatattttgaatacatacgactggaacgacacaatggag
atgaccgtcatcggcctgagtgacaatggaaactcaaccaatagttcccttaccaggacc
atccctgttcaatttgcagttgacctggtagcaaaagcccttccccaagactccaccact
tacatgaactttactctggaggacacatcacctaaaagactggtgaatgtatatgaggtg
cagaacttgggatttaagtctgtaccaatcacagtcaccttcactttcccaactaagctt
gagcacaaatttgaaatgaaggacttccaaatatctgtcttacagaaccatactcaatgt
ggaaagattattaattcaacaacagagtactgctctccagaaaaatactgcaagtccatc
gagtgtgaaagtttccttttggagaagtttttgacagttacatttgtgctgtctggaaat
gtttccttcaaggacctcgatcaacatgcaaggaacttgtcattgccaaagaaattcact
ggggatagagaaacagtccatttcatcagttttgtcaaactcagctatgacaaaaaacga
tatgtccagacagcgagtgacccaagggataactcttcaagcttccaccaaacacagatt
gatgttcaggctgagctcatcattcctccccatagaaatctgataatagggacaggagtt
ggagtaggactcttcctcctgatcatcatcacaatggccatgtatatgatgggatgcttc
cagagaaaaagccttgagaatgaagagaatgaaggggaatag
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integrated database retrieval system
