Oncorhynchus tshawytscha (Chinook salmon): 112252664
Help
Entry
112252664 CDS
T05605
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00600
Sphingolipid metabolism
otw01100
Metabolic pathways
Module
otw_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112252664
Enzymes [BR:
otw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
112252664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
BLH_phosphatase
Motif
Other DBs
NCBI-GeneID:
112252664
NCBI-ProteinID:
XP_024279877
LinkDB
All DBs
Position
LG01:complement(50393819..50410701)
Genome browser
AA seq
577 aa
AA seq
DB search
MMESVVNMSIDYKSALEVYKEMLLLYLEEGRRLVNTNCEALEPWQIIGATLISTLGAVWV
KGFLFQQETLTSRIKKQCFRLIRNIPFVGAAIQTQLNKALDDMSVSLCTLKEGMNYTKQL
PEQGLTQAEVLDRISEYETLNEVDWENGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHP
DIFPGVRKMEAEVVRMTCTLFNGGPNTCGTVTSGGTESILMACKAYRDMAYERGVKHPEI
IAPISVHAAFDKAANYFGMKLVHIPLDKNTMKVNVKAMRRAISKNTAMLVCSAPQFPHGI
IDPIEEVGKLALKYNIPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYG
YAPKGSSVILYSDKKYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMHMGEDG
YIKATKKIIDTARTIKTEIRKINGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLN
MLQYPSSIHICCTVLHTHEGVAKQLISDIKEQVALILKNPNEKTTGMGAIYGMAQSIPDR
SMVTEISRGFLDCLYSTEEPLSSQSQKTHMNGNGKAH
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaagtgtggtgaacatgtcaattgattacaagagtgccttggaggtatacaag
gagatgctgttgctctacctggaggaaggcaggcggcttgtgaacaccaactgtgaggcg
ttggaaccatggcagatcattggagccactctcatatctaccttaggagcagtctgggtc
aaaggcttcctgtttcagcaagaaaccctgacatcccgaatcaagaagcagtgctttcga
ctcatcagaaacataccctttgttggcgcggcaatccagacccagctgaacaaggccctg
gatgacatgtctgtcagtctttgcacactgaaggagggcatgaactacaccaaacagctg
cctgaacaagggctaacgcaagctgaagttctagacaggatcagcgagtacgaaacactg
aatgaagtggattgggagaatggacgagtgtccggtgcagtgtactggggagatcagaca
cttaccaaacttttggtgaaggtgtatggagactttgcatggagcaacccacttcaccca
gacatctttcctggtgtgaggaagatggaggcagaggttgtaagaatgacatgtaccctc
ttcaacggtgggcccaacacttgtggcacagtcacctctggaggaactgaaagcatattg
atggcatgcaaggcgtacagagacatggcctatgagcgaggtgtgaaacatcctgaaatc
attgcaccaatcagtgtccatgccgcctttgacaaagcagcaaactactttggaatgaag
cttgttcacatccccctggacaaaaatacaatgaaagtgaatgttaaggcgatgaggaga
gctatcagcaagaacacagccatgcttgtatgttccgcaccccagttcccgcatggaatc
attgatcctattgaggaagtaggaaagctggctttaaagtacaacatccctctgcatgtg
gatgcttgtttgggagggtttctcatcgtgttcatggccaaagccaattatccactggct
ccctttgacttcagggtaaagggtgtgaccagtatatctgcagacacacacaagtatggc
tacgcccctaaaggttcatcagtgatcctgtatagtgacaagaagtacaggcactaccag
tactttgtggctccagactggcaagggggcatctatgcgtccccatcagtggcaggatct
cggccaggcggtatcattgcagcgtgctgggctaccatgatgcacatgggagaggatggc
tacataaaggccaccaagaagataattgacactgcacgtaccatcaagacagaaatccgt
aagataaatggggtgtttgtgtttggagaccctgaagtgtccgtggtggcaataggctct
gacgtcttcgacatttttcgtttatccaatgcactgacttcaaagggttggaatctcaac
atgctacagtatccatccagcatccatatctgttgtactgtactgcacacacatgaaggt
gtggccaaacagttaatcagtgacatcaaagagcaggtggctctcattttgaaaaacccc
aatgagaagaccactggaatgggagcaatctatggcatggcccagtccatccctgacaga
tccatggtgaccgagatctcccgaggcttcttggactgcctctacagcacagaggagccc
ttgtcgtctcagtctcagaagacccatatgaatggcaacggcaaggcccactga
DBGET
integrated database retrieval system
