Oncorhynchus tshawytscha (Chinook salmon): 112255866
Help
Entry
112255866 CDS
T05605
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112255866
Enzymes [BR:
otw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
112255866
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
112255866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
112255866
NCBI-ProteinID:
XP_024284471
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MPSACDSPIDDIEDMVSADDPTPQERQYARKSIVPRARKRNTQQTTEVLQADSVIPGMQK
IWMRTWGCSHNNSDGEYMAGQLAASGYKMTEDPAEADLWLLNSCTVKNPAEDHFRNSIKK
AQEQDKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDN
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELVERARQS
FQEGVCEIWLTSEDTGAYGKDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
SKILNHPRVYAFLHVPVQSASDSVLMDMKREYCADDFRRVADFLKDKVPGITIATDIICG
FPGETDADFQETCDLVKEYRFPSLFINQFYPRPGTPAAKMDQVPAQVKKQRTKELSTLFH
SYNPYHHKIGETQLVLVTEESFDAQYYVAHNKYYEQVLVPKRSDFKGKMIEVEIFEAGKH
FLKGRPLDGSVVFTPSIAEPLQQGEVSGLSQEQLSLQQNGSVPSSGVLTVSWSPWSLDRE
GLKLLSIGLAVVAILVVFMWEKLH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcctgtgactccccgatcgatgacattgaggacatggtgtcagctgacgac
ccgactccacaggagaggcagtatgccaggaagagcatcgtccccagagccaggaagaga
aacacgcagcagacgacagaggtgctgcaagcagacagtgtgatccctggcatgcagaag
atctggatgaggacgtggggctgctcccacaacaactcagacggggaatacatggctgga
cagctggcagcgagcggatacaagatgacagaggaccccgcggaggctgatctgtggctg
ctcaacagctgcactgtgaaaaacccggccgaagatcacttcagaaactccatcaagaag
gcccaggagcaggataagaaggtggtggtagctggatgtgttccccaggcccagcccagg
atggactaccttaaaggactcagcatcatcggggttcagcagattgaccgtgtggtggag
gtggtggacgaggctgttaaaggtcactcggtgcgtctgctgggtcagaagaaggacaat
gggaagcgtctcggcggagccagactggatctgcccaagattagaaagaaccctctgata
gagatcatttcaatcaatacaggttgtctgaatgcctgtacgtactgtaaaaccaagcat
gccagaggagacctggccagctaccccgtggaggaactcgtggagagagccagacagtcc
ttccaagagggtgtgtgtgagatctggctgaccagtgaggacaccggggcttatgggaag
gacatcgggacagacctgcccactctgctatggagactagtggaagaaattcccgaagga
gccatgctgagactgggcatgaccaaccctccatacatcctggagcacctagaggagatg
tctaagatcctgaaccatcctcgtgtgtatgcctttctccatgtcccggtgcagtctgcc
tccgacagtgtcctgatggatatgaagagggagtactgtgctgacgacttcaggcgcgtc
gctgacttcctgaaagacaaggttcctggtatcaccatcgcaacggacatcatctgtggt
ttcccaggggagacggatgctgacttccaggagacatgtgacctggtgaaggagtatcgc
ttccccagcctcttcatcaaccagttctacccccggcctggcacccccgccgccaagatg
gaccaggtccccgcccaagtgaaaaaacaacggaccaaagagctgtcgaccctgttccac
tcctataacccctaccaccacaagattggggagacccagctggtgcttgtgactgaggag
tcctttgacgcccagtactatgtggctcacaacaaatactatgagcaggtgctggtgccc
aagaggtcagacttcaaggggaagatgattgaggtggagatcttcgaggctggcaaacac
ttcctgaagggaagaccgctggacggctccgtagtgttcactccctccatcgccgagccg
ctgcagcagggggaggtgtctgggctcagtcaggagcagctgtccctccagcagaatggg
tccgtcccctcctcaggcgtgctgactgtatcctggagcccctggagcctggacagagag
gggctgaagctgctgtctatcggcctggctgtggtggctatcctagtggtcttcatgtgg
gagaaactccactga
DBGET
integrated database retrieval system
