Oncorhynchus tshawytscha (Chinook salmon): 112256149
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Entry
112256149 CDS
T05605
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04210
Apoptosis
otw04218
Cellular senescence
otw04620
Toll-like receptor signaling pathway
otw04621
NOD-like receptor signaling pathway
otw04622
RIG-I-like receptor signaling pathway
otw04623
Cytosolic DNA-sensing pathway
otw04625
C-type lectin receptor signaling pathway
otw04920
Adipocytokine signaling pathway
otw05132
Salmonella infection
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112256149
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112256149
04218 Cellular senescence
112256149
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112256149
04621 NOD-like receptor signaling pathway
112256149
04622 RIG-I-like receptor signaling pathway
112256149
04623 Cytosolic DNA-sensing pathway
112256149
04625 C-type lectin receptor signaling pathway
112256149
09152 Endocrine system
04920 Adipocytokine signaling pathway
112256149
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112256149
09171 Infectious disease: bacterial
05132 Salmonella infection
112256149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112256149
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
112256149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
112256149
NCBI-ProteinID:
XP_042181671
LinkDB
All DBs
Position
LG08:62157134..62181162
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AA seq
925 aa
AA seq
DB search
MAEEEPYLPHQPYNFDIDPLWDPLNFPPMSHSNSLRTVTADGPYLQIIEQPKQRGFRFRY
GCEGPSHGGLPGASSEKNRKSYPNIKICNYQGMARVVVQLVTNSKDAHLHAHSLVGKQCD
KGICIADLQPKDSSISFPNLGILHVTKKNVSKTLEDRMSEAYRMGYNCGIVIHPEMDAFQ
GEFRIPRELTDHQRNLISSAASYQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPI
FDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGD
FSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEV
QRKRQKTLPNFQDYSGHGGAGGLYRGPGGGGPATGGGGGFFQGYSTYNNYGTSYNSGFSP
GMSGGGAGIKHAPQGRAEDSGDDSDMDDDPASGTVVGVRAKSEDASAGETSEESGAGVEL
GPGHRTGECVLVARLVDVAERQAEALFQYAVTGDVSYLLAPQRQLMTAQDENGDTGLHLG
VIHSQTDAVRSLAQVLSALPGEEVLNMRNNLYQTPLHIAVITQQKAAAEALLLAGADVTL
CDRHGNTALHLAAQQKEGGMVGFLLRHREIVELVDLPNTAGLCSLHLAVLANSLCSLRDL
LVNGGSVEVQERSCGRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHTATGRG
SVKLTALLMAAGADPHKENFEPLFFREHDCCVDEEEDEGYIPGTTPLNMAATPEVLEILN
GKEYKPETNGFVFVPPQGDMQSLGSDTKRALCQALECPEDGWEMLAHILGLGILNSAFRL
SSSPASTLLDSYEVSGGKVKDLLEGLRTVGNCSALTVLEGALRETEQAPPAPQSTTKLLE
RVCDLKLDGWEDSGVCDSGVELSTA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggagccttacctacctcaccaaccgtacaactttgacatagatccacta
tgggatcccctgaatttccctcccatgtcacactccaactcactccggacagttacagca
gatgggccctacctccaaatcattgaacagcctaaacagcggggcttcaggtttcgttat
ggctgtgagggaccttctcacggcgggctaccaggggcctctagtgagaagaacagaaag
tcctatcccaatatcaagatctgtaactatcaggggatggcacgtgtggtggtacagctg
gtgaccaactctaaagatgcccacctccatgcccacagtctggtgggcaagcagtgtgac
aagggcatctgcatcgcagacctacagccaaaagactccagcatcagtttccccaacttg
ggcatcctccacgtgaccaagaagaacgtgagtaagacactggaggaccgtatgtctgag
gcctacaggatgggctacaactgcggtatcgtcatccatcccgagatggacgcctttcag
ggagagttccgcatcccccgagagctcactgatcaccagagaaatctgatcagcagcgca
gcgtcctaccaggctaaagagatggacctgagcgtggtgcgcctcatgttcacagccttc
ctcccagacagtgacgggggcttctcccgtagactggaccccgtcatatcagaccccatc
ttcgacagcaaagctccaaatgcatctaacctgaagatagtgcggatggaccgaacagct
ggctgtgtgacgggaggagaggaggtctacctgctctgtgacaaggttcagaaagatgac
atccaggtgcgtttctatgaggatgacgagacagggctgacatgggaggcctttggggac
ttctcccccaccgatgtccaccgacagtttgccattgttttcaagacccccaaatacaga
gacctgaacctccagaaacccacctcggtgtttgtgcagctgaagcgtaaatcggacaat
gagacgagcgagcccaagcccttcacctaccatccgcagatcatagataaggaagaagtg
cagaggaagagacagaagaccctgcctaacttccaggactacagcggccacggtggagca
gggggcctgtaccggggaccagggggggggggtcccgctacagggggaggaggaggtttc
ttccagggctattccacctacaataactatggcaccagctacaactctggcttttcccct
ggcatgagtggtggcggggcaggaattaaacatgctccacaaggcagagcggaggacagt
ggtgatgacagtgacatggatgatgacccggcctcagggacagtggtgggggtccgagcc
aagtcagaggatgcctctgctggggagacgagtgaggagagcggggccggtgtggagcta
ggaccagggcacaggactggagagtgtgtgctggtggccaggctggtggatgttgctgag
aggcaggctgaagccctcttccagtacgccgtcactggtgacgtcagctacctgctggct
ccacagcgccagctcatgactgctcaggatgagaacggtgacactggtctccatctgggg
gtgatccacagccagacagacgcagtcaggagtctagcccaggtcctctctgccctgcct
ggagaggaggtccttaacatgagaaacaacctctaccagactcctttgcacatagcggtg
ataacacagcagaaggcggcagctgaggccctcttattggctggggctgatgtcactctg
tgtgatcgccacggaaacacagctcttcacctggccgcccagcagaaggagggaggtatg
gtgggatttctactgagacacagagagatagtggaactagtggacctccccaacacagca
ggactgtgctccctccacctggctgtgcttgccaacagcctgtgttccctcagggacctc
ctggtgaacgggggcagtgtggaggtccaggagaggagctgcggccgcacggcgctccat
ctggccactgagctggacaacgtctccctggcaggctgcctgctactggaggggaatgct
gatgtggactgctgcacctacaacggttccagccctctccatacagccacagggcggggc
tctgtcaagctgaccgctctcctcatggctgcaggtgccgatcctcacaaagagaacttt
gagcccctgttcttcagagagcatgactgctgtgtggatgaggaagaggacgaaggctac
atcccagggacaactcctctcaacatggctgccactcctgaggtgttggaaatcttgaat
ggaaaagagtacaagcccgagaccaacggcttcgtcttcgtcccccctcaaggtgacatg
cagagcctgggctcagacacaaagcgggcactatgccaggctctggagtgcccggaggat
ggctgggagatgctggcacatatactgggcctgggcatcctcaacagtgccttcagactc
agctcctcccccgcaagcacgctgctggacagctacgaggtgtctggaggaaaggtcaag
gaccttttggagggactcaggactgtagggaactgctctgctttgacagtactggagggg
gcactgcgtgaaacagaacaggctccaccagccccccaaagcaccacaaaactcttagaa
cgtgtgtgtgatctgaagctggacggatgggaggacagcggagtgtgtgacagtggggtg
gagctctccacagcgtga
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